Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC011979.1-201ENST00000472300 483 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 AC096751.1-202ENST00000502691 1067 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 KCTD9P5-201ENST00000504141 1170 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 MTCYBP16-201ENST00000509187 1129 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 AC034268.2-201ENST00000571784 482 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 AC106791.2-201ENST00000604680 391 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 OR2AS2P-201ENST00000606902 342 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 AC023158.2-201ENST00000614876 543 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 AC009039.2-201ENST00000624524 529 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 U6.101-201ENST00000637707 76 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 RNU6-906P-201ENST00000384700 70 ntBASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 RNA5SP38-201ENST00000410750 119 ntBASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 MTATP6P20-201ENST00000414147 562 ntBASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 USP9YP24-201ENST00000434374 697 ntBASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 USP9YP17-201ENST00000444617 696 ntBASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 RN7SL633P-201ENST00000488974 297 ntBASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 MTCYBP17-201ENST00000503579 789 ntBASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 TXNP6-201ENST00000510190 310 ntBASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 AC103783.1-201ENST00000520506 373 ntBASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 AL132857.1-201ENST00000555180 708 ntBASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 MAGOH2P-202ENST00000584384 429 ntBASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 AL035411.2-201ENST00000604022 421 ntBASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 AC010738.1-201ENST00000604970 987 ntBASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 AC120349.2-201ENST00000625002 298 ntBASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 API5P2-201ENST00000397055 1498 ntBASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHROOM1Q2M3G4 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 SNRPEP3-201ENST00000338402 276 ntBASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 RNU4-82P-201ENST00000362443 140 ntBASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 U3.12-201ENST00000364498 214 ntBASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 SNORA46-201ENST00000384762 135 ntBASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 MIR34A-201ENST00000385130 110 ntBASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 AL356057.3-201ENST00000402607 340 ntBASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 AL590084.1-201ENST00000407885 387 ntBASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 RNU6-584P-201ENST00000410350 95 ntBASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 SSXP9-201ENST00000417503 292 ntBASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 AC092427.1-201ENST00000439177 601 ntBASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 AL121871.1-201ENST00000443413 436 ntBASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 PTENP1-201ENST00000447117 1215 ntBASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 USP9YP25-201ENST00000457708 443 ntBASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 RPS26P21-201ENST00000475397 348 ntBASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 HMGB1P28-201ENST00000507778 552 ntBASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 RNY4P37-201ENST00000516225 96 ntBASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 MTND1P8-201ENST00000571424 950 ntBASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
SHROOM1Q2M3G4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 MTCO1P23-201ENST00000415223 1526 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 RNU6-851P-201ENST00000384565 107 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 RPS4XP8-201ENST00000402039 771 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 ERHP2-201ENST00000402323 299 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 AL138827.1-201ENST00000402666 306 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 AC068533.2-201ENST00000411872 306 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 RPS15AP38-201ENST00000413110 372 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 AC092447.6-201ENST00000414578 210 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 AC245054.2-201ENST00000415639 319 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 MRPL50P2-201ENST00000416821 482 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 RPS20P5-201ENST00000434808 360 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 AC007327.1-201ENST00000447461 264 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 RPL39P6-201ENST00000448289 150 ntBASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.3□□□□□ -1.88
SHROOM1Q2M3G4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms