Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.07□□□□□ -1.6
RSPO4Q2I0M5 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 U3.3-201ENST00000362986 216 ntBASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 RNU6-317P-201ENST00000384031 107 ntBASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 RNU6-708P-201ENST00000384217 107 ntBASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 Y_RNA.458-201ENST00000384240 102 ntBASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 RNA5SP171-201ENST00000391071 115 ntBASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 RNU6-131P-201ENST00000391144 107 ntBASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 MIR1182-201ENST00000408363 97 ntBASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 AL590399.2-201ENST00000427536 309 ntBASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 AL590233.1-201ENST00000430017 456 ntBASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 AC140059.1-201ENST00000489238 361 ntBASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 RNA5SP170-201ENST00000517150 101 ntBASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 IGHVII-53-1-201ENST00000519538 255 ntBASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 AC093023.1-201ENST00000547375 507 ntBASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 AC133555.2-201ENST00000550213 292 ntBASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 AC023575.1-201ENST00000580510 358 ntBASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 AC006363.1-201ENST00000603806 463 ntBASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 CASC19-204ENST00000641001 2055 ntBASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RSPO4Q2I0M5 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 SAMMSON-226ENST00000642089 1582 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 RNA5SP258-201ENST00000362750 119 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 SNORD1C-201ENST00000363315 78 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 RNU6-1035P-201ENST00000384477 107 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 Y_RNA.568-201ENST00000384742 113 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 HMGN1P24-201ENST00000412282 298 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 AC017079.2-201ENST00000416102 485 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 BX842559.1-201ENST00000419615 532 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 AC093414.1-201ENST00000434712 514 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 RPL35AP22-201ENST00000436855 335 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 AC239809.1-201ENST00000450470 217 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 RPL23AP81-201ENST00000455252 467 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 snoU13.29-201ENST00000459370 104 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 AP000942.1-201ENST00000463969 747 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 RN7SL319P-201ENST00000480656 221 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 AC093840.1-201ENST00000511599 336 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 RN7SKP67-201ENST00000515905 235 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 AC090615.1-201ENST00000577519 154 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 AL138889.2-201ENST00000603883 242 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 AC012443.1-201ENST00000605605 231 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 AC034102.8-201ENST00000615146 484 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 AC008725.1-201ENST00000605123 2263 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 AC068870.1-201ENST00000563737 2455 ntBASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RSPO4Q2I0M5 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms