Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDK3Q00526 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.39□□□□□ -1.87
CDK3Q00526 AL133271.1-201ENST00000538229 291 ntBASIC3.39□□□□□ -1.87
CDK3Q00526 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.39□□□□□ -1.87
CDK3Q00526 U73023.1-201ENST00000603134 700 ntBASIC3.39□□□□□ -1.87
CDK3Q00526 OR10AB1P-201ENST00000609613 938 ntBASIC3.39□□□□□ -1.87
CDK3Q00526 MIR6130-201ENST00000619419 109 ntBASIC3.39□□□□□ -1.87
CDK3Q00526 AC022149.2-201ENST00000621061 203 ntBASIC3.39□□□□□ -1.87
CDK3Q00526 AC009268.2-201ENST00000621925 457 ntBASIC3.39□□□□□ -1.87
CDK3Q00526 AC112204.3-201ENST00000623822 332 ntBASIC3.39□□□□□ -1.87
CDK3Q00526 AC244205.2-202ENST00000635781 342 ntBASIC3.39□□□□□ -1.87
CDK3Q00526 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CDK3Q00526 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.39□□□□□ -1.87
CDK3Q00526 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.39□□□□□ -1.87
CDK3Q00526 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.39□□□□□ -1.87
CDK3Q00526 AL356274.2-201ENST00000624379 3752 ntBASIC3.39□□□□□ -1.87
CDK3Q00526 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDK3Q00526 AC032011.1-201ENST00000611703 1549 ntBASIC3.39□□□□□ -1.87
CDK3Q00526 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.39□□□□□ -1.87
CDK3Q00526 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDK3Q00526 MTND5P1-201ENST00000445440 1375 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDK3Q00526 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDK3Q00526 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CDK3Q00526 AC009812.4-201ENST00000569134 1805 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CDK3Q00526 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDK3Q00526 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CDK3Q00526 RNA5SP387-201ENST00000364226 106 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDK3Q00526 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.38□□□□□ -1.87
CDK3Q00526 DEFB109C-201ENST00000382575 264 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 DEFB109B-201ENST00000382656 264 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 RNU6-533P-201ENST00000384144 107 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 PTMAP5-201ENST00000393073 333 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.38□□□□□ -1.87
CDK3Q00526 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDK3Q00526 RNU6-516P-201ENST00000411381 104 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 BX323014.1-201ENST00000412876 237 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 RPL17P12-201ENST00000413391 526 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 AL158156.1-201ENST00000422509 473 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 CYCSP46-201ENST00000423569 204 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 AC233728.2-201ENST00000425348 757 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 AC129850.1-201ENST00000436203 508 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 RPL22P17-201ENST00000438729 315 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 AL357552.1-201ENST00000445254 415 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 TPT1P14-201ENST00000448018 505 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.38□□□□□ -1.87
CDK3Q00526 AP001086.1-201ENST00000494882 321 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 VN1R104P-201ENST00000505115 1009 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
CDK3Q00526 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.38□□□□□ -1.87
CDK3Q00526 OR5BM1P-201ENST00000512021 366 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.38□□□□□ -1.87
CDK3Q00526 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.38□□□□□ -1.87
CDK3Q00526 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.38□□□□□ -1.87
CDK3Q00526 AP000907.2-201ENST00000530827 353 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.38□□□□□ -1.87
CDK3Q00526 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
CDK3Q00526 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.38□□□□□ -1.87
CDK3Q00526 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.38□□□□□ -1.87
CDK3Q00526 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.38□□□□□ -1.87
CDK3Q00526 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.38□□□□□ -1.87
CDK3Q00526 MED28P6-201ENST00000558776 231 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.38□□□□□ -1.87
CDK3Q00526 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.38□□□□□ -1.87
CDK3Q00526 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.38□□□□□ -1.87
CDK3Q00526 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 MIR548AB-201ENST00000584917 84 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 AC067852.3-201ENST00000589177 561 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 AC012065.4-201ENST00000602445 679 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.38□□□□□ -1.87
CDK3Q00526 AC096577.2-201ENST00000611455 153 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.38□□□□□ -1.87
CDK3Q00526 AC012150.2-201ENST00000621300 544 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 AC026422.1-201ENST00000623961 452 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDK3Q00526 AC116096.1-201ENST00000566804 2314 ntBASIC3.38□□□□□ -1.87
CDK3Q00526 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CDK3Q00526 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDK3Q00526 AL133383.2-201ENST00000622958 2336 ntBASIC3.37□□□□□ -1.87
CDK3Q00526 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDK3Q00526 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.37□□□□□ -1.87
CDK3Q00526 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.37□□□□□ -1.87
CDK3Q00526 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDK3Q00526 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.37□□□□□ -1.87
CDK3Q00526 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
CDK3Q00526 Y_RNA.46-201ENST00000362695 102 ntBASIC3.37□□□□□ -1.87
CDK3Q00526 RNU5E-5P-201ENST00000365379 116 ntBASIC3.37□□□□□ -1.87
CDK3Q00526 RPS20P2-201ENST00000402520 389 ntBASIC3.37□□□□□ -1.87
CDK3Q00526 AC078974.1-201ENST00000411597 223 ntBASIC3.37□□□□□ -1.87
CDK3Q00526 MTND1P21-201ENST00000412991 285 ntBASIC3.37□□□□□ -1.87
CDK3Q00526 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.37□□□□□ -1.87
CDK3Q00526 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.37□□□□□ -1.87
CDK3Q00526 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.37□□□□□ -1.87
CDK3Q00526 AC244035.1-201ENST00000430042 390 ntBASIC3.37□□□□□ -1.87
CDK3Q00526 AC090774.1-201ENST00000435925 246 ntBASIC3.37□□□□□ -1.87
CDK3Q00526 HMGB1P12-201ENST00000438594 598 ntBASIC3.37□□□□□ -1.87
CDK3Q00526 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms