Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.08□□□□□ -2.08
HOXC5Q00444 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.08□□□□□ -2.08
HOXC5Q00444 SETP11-201ENST00000473027 690 ntBASIC2.08□□□□□ -2.08
HOXC5Q00444 RNA5SP281-201ENST00000516504 135 ntBASIC2.08□□□□□ -2.08
HOXC5Q00444 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.08□□□□□ -2.08
HOXC5Q00444 MTCYBP20-201ENST00000524239 1129 ntBASIC2.08□□□□□ -2.08
HOXC5Q00444 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.08□□□□□ -2.08
HOXC5Q00444 AC106734.1-201ENST00000568646 663 ntBASIC2.08□□□□□ -2.08
HOXC5Q00444 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.08□□□□□ -2.08
HOXC5Q00444 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.08□□□□□ -2.08
HOXC5Q00444 AC006023.1-201ENST00000603944 259 ntBASIC2.08□□□□□ -2.08
HOXC5Q00444 AC010738.1-201ENST00000604970 987 ntBASIC2.08□□□□□ -2.08
HOXC5Q00444 AC012443.1-201ENST00000605605 231 ntBASIC2.08□□□□□ -2.08
HOXC5Q00444 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.08□□□□□ -2.08
HOXC5Q00444 AC132825.7-201ENST00000638744 335 ntBASIC2.08□□□□□ -2.08
HOXC5Q00444 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HOXC5Q00444 Z99496.1-201ENST00000469424 1477 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
HOXC5Q00444 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HOXC5Q00444 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.07□□□□□ -2.08
HOXC5Q00444 AL139276.1-201ENST00000311910 1001 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 SNORD56.4-201ENST00000363883 71 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HOXC5Q00444 RNU6-883P-201ENST00000384597 107 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HOXC5Q00444 AL121978.1-201ENST00000402778 359 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 AL136372.1-201ENST00000403060 228 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 AL591416.1-201ENST00000404015 867 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 AL024474.1-201ENST00000404655 591 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 RNA5SP338-201ENST00000410495 85 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 HMGB3P2-201ENST00000411913 584 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.07□□□□□ -2.08
HOXC5Q00444 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.07□□□□□ -2.08
HOXC5Q00444 AC107081.1-201ENST00000414975 361 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.07□□□□□ -2.08
HOXC5Q00444 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.07□□□□□ -2.08
HOXC5Q00444 MTCO3P2-201ENST00000457365 171 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 AC104435.1-201ENST00000483483 166 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.07□□□□□ -2.08
HOXC5Q00444 TTC39CP1-201ENST00000512513 755 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 AC114781.4-201ENST00000513707 639 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 CASP1P1-201ENST00000526345 212 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.07□□□□□ -2.08
HOXC5Q00444 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.07□□□□□ -2.08
HOXC5Q00444 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HOXC5Q00444 AC103810.1-201ENST00000579873 453 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 AC027309.3-201ENST00000623419 351 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 AC079597.1-201ENST00000624306 508 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 MFSD8-213ENST00000641134 1327 ntBASIC2.07□□□□□ -2.08
HOXC5Q00444 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.07□□□□□ -2.08
HOXC5Q00444 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
HOXC5Q00444 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.06□□□□□ -2.08
HOXC5Q00444 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
HOXC5Q00444 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
HOXC5Q00444 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HOXC5Q00444 MIRLET7G-201ENST00000362280 84 ntBASIC2.06□□□□□ -2.08
HOXC5Q00444 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HOXC5Q00444 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HOXC5Q00444 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.06□□□□□ -2.08
HOXC5Q00444 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.06□□□□□ -2.08
HOXC5Q00444 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HOXC5Q00444 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.06□□□□□ -2.08
HOXC5Q00444 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HOXC5Q00444 RAC1P7-201ENST00000445367 377 ntBASIC2.06□□□□□ -2.08
HOXC5Q00444 RPL31P60-201ENST00000478450 367 ntBASIC2.06□□□□□ -2.08
HOXC5Q00444 RPL23AP70-201ENST00000483361 460 ntBASIC2.06□□□□□ -2.08
HOXC5Q00444 AC147055.4-201ENST00000504399 745 ntBASIC2.06□□□□□ -2.08
HOXC5Q00444 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.06□□□□□ -2.08
HOXC5Q00444 RNU6-751P-201ENST00000516382 101 ntBASIC2.06□□□□□ -2.08
HOXC5Q00444 AP001646.1-201ENST00000527936 915 ntBASIC2.06□□□□□ -2.08
HOXC5Q00444 AC124293.1-201ENST00000530034 493 ntBASIC2.06□□□□□ -2.08
HOXC5Q00444 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
HOXC5Q00444 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.06□□□□□ -2.08
HOXC5Q00444 AC090888.1-201ENST00000561335 1141 ntBASIC2.06□□□□□ -2.08
HOXC5Q00444 AC104229.1-201ENST00000561364 255 ntBASIC2.06□□□□□ -2.08
HOXC5Q00444 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.06□□□□□ -2.08
HOXC5Q00444 AC011260.1-201ENST00000578420 472 ntBASIC2.06□□□□□ -2.08
HOXC5Q00444 MIR5694-201ENST00000581190 76 ntBASIC2.06□□□□□ -2.08
HOXC5Q00444 AC090616.3-201ENST00000582184 217 ntBASIC2.06□□□□□ -2.08
HOXC5Q00444 MIR5007-201ENST00000583098 95 ntBASIC2.06□□□□□ -2.08
HOXC5Q00444 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.06□□□□□ -2.08
HOXC5Q00444 AP001542.1-201ENST00000591314 200 ntBASIC2.06□□□□□ -2.08
HOXC5Q00444 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.06□□□□□ -2.08
HOXC5Q00444 AC026790.2-201ENST00000606282 430 ntBASIC2.06□□□□□ -2.08
HOXC5Q00444 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.06□□□□□ -2.08
HOXC5Q00444 AC006020.1-201ENST00000420179 1854 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 Z82209.1-201ENST00000422141 2135 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
HOXC5Q00444 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HOXC5Q00444 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HOXC5Q00444 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
HOXC5Q00444 RNU6-1155P-201ENST00000363554 107 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 RNU6-115P-201ENST00000364310 107 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 SNORA36C-201ENST00000384289 132 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 MIR221-201ENST00000385135 110 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 MIR16-1-201ENST00000385271 89 ntBASIC2.05□□□□□ -2.08
HOXC5Q00444 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
HOXC5Q00444 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.05□□□□□ -2.08
HOXC5Q00444 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.05□□□□□ -2.08
HOXC5Q00444 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms