Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 LSM1P1-201ENST00000438629 273 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.01□□□□□ -1.93
CCNA1P78396 SSXP5-201ENST00000443473 287 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 AL353718.1-201ENST00000451028 517 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 OR6K1P-201ENST00000456766 971 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 AC008379.1-201ENST00000463655 464 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 AL049714.1-201ENST00000466686 347 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 UBL5P3-201ENST00000475112 231 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.01□□□□□ -1.93
CCNA1P78396 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CCNA1P78396 CR383656.7-201ENST00000548164 174 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 AC079148.1-201ENST00000565944 819 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 AC015688.2-201ENST00000584523 262 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 AC008739.2-201ENST00000597006 317 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 RPL23AP88-201ENST00000605759 454 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 AC004852.3-201ENST00000614131 326 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 AL445493.3-201ENST00000619568 477 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 U4.3-201ENST00000621047 82 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 AL121594.5-201ENST00000631724 573 ntBASIC3.01□□□□□ -1.93
CCNA1P78396 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
CCNA1P78396 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3□□□□□ -1.93
CCNA1P78396 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CCNA1P78396 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CCNA1P78396 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CCNA1P78396 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3□□□□□ -1.93
CCNA1P78396 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCNA1P78396 RPL9P7-201ENST00000330965 580 ntBASIC3□□□□□ -1.93
CCNA1P78396 RNA5SP432-201ENST00000362480 116 ntBASIC3□□□□□ -1.93
CCNA1P78396 U8.2-201ENST00000363156 134 ntBASIC3□□□□□ -1.93
CCNA1P78396 SNORA36C-201ENST00000384289 132 ntBASIC3□□□□□ -1.93
CCNA1P78396 MIR27B-201ENST00000385129 97 ntBASIC3□□□□□ -1.93
CCNA1P78396 AL512633.1-201ENST00000399931 655 ntBASIC3□□□□□ -1.93
CCNA1P78396 RNU2-25P-201ENST00000411041 191 ntBASIC3□□□□□ -1.93
CCNA1P78396 TAF13P2-201ENST00000416876 286 ntBASIC3□□□□□ -1.93
CCNA1P78396 UBE2D3P1-201ENST00000436669 444 ntBASIC3□□□□□ -1.93
CCNA1P78396 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3□□□□□ -1.93
CCNA1P78396 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3□□□□□ -1.93
CCNA1P78396 RNF2P1-201ENST00000442955 1010 ntBASIC3□□□□□ -1.93
CCNA1P78396 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3□□□□□ -1.93
CCNA1P78396 RPL23AP20-201ENST00000447965 421 ntBASIC3□□□□□ -1.93
CCNA1P78396 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3□□□□□ -1.93
CCNA1P78396 COL6A4P2-205ENST00000509855 506 ntBASIC3□□□□□ -1.93
CCNA1P78396 AC008549.1-201ENST00000512900 643 ntBASIC3□□□□□ -1.93
CCNA1P78396 MTCO1P47-201ENST00000523889 1271 ntBASIC3□□□□□ -1.93
CCNA1P78396 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3□□□□□ -1.93
CCNA1P78396 AC027176.1-201ENST00000560204 514 ntBASIC3□□□□□ -1.93
CCNA1P78396 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3□□□□□ -1.93
CCNA1P78396 AP003973.1-201ENST00000604639 691 ntBASIC3□□□□□ -1.93
CCNA1P78396 AL021368.1-201ENST00000607490 540 ntBASIC3□□□□□ -1.93
CCNA1P78396 AC025588.4-201ENST00000615802 908 ntBASIC3□□□□□ -1.93
CCNA1P78396 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3□□□□□ -1.93
CCNA1P78396 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3□□□□□ -1.93
CCNA1P78396 AC009812.4-201ENST00000569134 1805 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 RNU1-105P-201ENST00000363470 161 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 RNU6-353P-201ENST00000364266 108 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 RNU6-1180P-201ENST00000364935 107 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 RNA5SP354-201ENST00000391247 136 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.99□□□□□ -1.93
CCNA1P78396 RNU2-28P-201ENST00000410457 189 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 RN7SKP192-201ENST00000411291 327 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.99□□□□□ -1.93
CCNA1P78396 AL136133.1-201ENST00000413694 376 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 AL451074.5-201ENST00000415894 435 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 DEFB130D-201ENST00000426866 237 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 AL590383.1-201ENST00000428602 75 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.99□□□□□ -1.93
CCNA1P78396 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.99□□□□□ -1.93
CCNA1P78396 AC024082.2-201ENST00000434771 238 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.99□□□□□ -1.93
CCNA1P78396 YWHAZP7-201ENST00000436906 631 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 AC010095.1-201ENST00000443543 144 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 GXYLT1P1-201ENST00000446657 490 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 AC013828.1-201ENST00000481845 158 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 ANXA2P1-201ENST00000505539 926 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 AC025768.1-201ENST00000510057 267 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.99□□□□□ -1.93
CCNA1P78396 AC104986.1-201ENST00000517978 436 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.99□□□□□ -1.93
CCNA1P78396 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.99□□□□□ -1.93
CCNA1P78396 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.99□□□□□ -1.93
CCNA1P78396 MIR4635-201ENST00000583759 79 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.99□□□□□ -1.93
CCNA1P78396 TUG1_1.1-201ENST00000610654 145 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 MIR8084-201ENST00000614105 89 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 AC011330.2-201ENST00000621680 635 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 AC097460.3-201ENST00000623099 442 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 AC103798.2-201ENST00000624292 632 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.99□□□□□ -1.93
CCNA1P78396 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.99□□□□□ -1.93
CCNA1P78396 MTND5P19-201ENST00000424872 1794 ntBASIC2.99□□□□□ -1.93
CCNA1P78396 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.99□□□□□ -1.93
CCNA1P78396 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.99□□□□□ -1.93
CCNA1P78396 ZNF658B-202ENST00000615961 3375 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 RNU6-198P-201ENST00000384258 104 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 MIR181A2-201ENST00000384863 110 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 MIR592-201ENST00000384959 97 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 RPS4XP7-201ENST00000406274 780 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 RNU2-43P-201ENST00000410306 190 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 RAP1BP1-201ENST00000412709 553 ntBASIC2.98□□□□□ -1.93
CCNA1P78396 BX682237.1-201ENST00000415016 335 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms