Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 RNA5SP154-201ENST00000516193 111 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.77□□□□□ -1.65
HERVK_113P62684 AC125611.2-201ENST00000551907 647 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 OR4T1P-201ENST00000554933 911 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.77□□□□□ -1.65
HERVK_113P62684 CYP4A43P-201ENST00000568156 121 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 RPS3AP23-202ENST00000574601 686 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.77□□□□□ -1.65
HERVK_113P62684 AC018638.8-201ENST00000588755 281 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 OR6R2P-201ENST00000609216 300 ntBASIC4.77□□□□□ -1.65
HERVK_113P62684 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.77□□□□□ -1.65
HERVK_113P62684 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.77□□□□□ -1.65
HERVK_113P62684 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.77□□□□□ -1.65
HERVK_113P62684 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HERVK_113P62684 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HERVK_113P62684 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HERVK_113P62684 AC006026.1-201ENST00000444025 1803 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.76□□□□□ -1.65
HERVK_113P62684 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.76□□□□□ -1.65
HERVK_113P62684 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
HERVK_113P62684 NEAT1-202ENST00000501122 22743 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 OR1S2-201ENST00000302592 978 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 RNU5E-8P-201ENST00000363502 116 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 RHOT1P2-201ENST00000366423 333 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HERVK_113P62684 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.76□□□□□ -1.65
HERVK_113P62684 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HERVK_113P62684 RNU6-373P-201ENST00000411247 98 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.76□□□□□ -1.65
HERVK_113P62684 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HERVK_113P62684 IFNWP4-201ENST00000453148 294 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 AC078785.3-201ENST00000476607 425 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
HERVK_113P62684 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.76□□□□□ -1.65
HERVK_113P62684 HMGB1P21-201ENST00000502313 581 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 AC020893.1-201ENST00000502452 580 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 COX7A2P2-201ENST00000505291 250 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.76□□□□□ -1.65
HERVK_113P62684 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.76□□□□□ -1.65
HERVK_113P62684 SNORD116-26-201ENST00000516006 96 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.76□□□□□ -1.65
HERVK_113P62684 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.76□□□□□ -1.65
HERVK_113P62684 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.76□□□□□ -1.65
HERVK_113P62684 OR5AL2P-201ENST00000532185 920 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.76□□□□□ -1.65
HERVK_113P62684 AC243972.3-201ENST00000539655 198 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 ANP32BP3-201ENST00000559213 706 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HERVK_113P62684 AC044792.1-201ENST00000593294 196 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 AC005255.1-201ENST00000593748 216 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 AC008739.3-201ENST00000603262 127 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.76□□□□□ -1.65
HERVK_113P62684 AL590099.1-201ENST00000615276 138 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 AL354798.1-201ENST00000622505 329 ntBASIC4.76□□□□□ -1.65
HERVK_113P62684 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.76□□□□□ -1.65
HERVK_113P62684 AC007529.1-201ENST00000418574 2178 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 DDX18P3-201ENST00000404856 2007 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.75□□□□□ -1.65
HERVK_113P62684 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.75□□□□□ -1.65
HERVK_113P62684 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.75□□□□□ -1.65
HERVK_113P62684 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HERVK_113P62684 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HERVK_113P62684 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HERVK_113P62684 RNU6-845P-201ENST00000362578 103 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 RNA5SP124-201ENST00000362739 110 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 Y_RNA.157-201ENST00000363638 102 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 XGY1-201ENST00000381172 446 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HERVK_113P62684 RNU6-116P-201ENST00000384042 109 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 Y_RNA.548-201ENST00000384656 105 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HERVK_113P62684 AL590704.1-201ENST00000402856 794 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.75□□□□□ -1.65
HERVK_113P62684 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.75□□□□□ -1.65
HERVK_113P62684 AL138785.1-201ENST00000425821 331 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.75□□□□□ -1.65
HERVK_113P62684 AC093156.1-201ENST00000440382 670 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 RAC1P7-201ENST00000445367 377 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 CBWD4P-201ENST00000445695 655 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 ABCF2P2-201ENST00000450549 296 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 HMGB3P21-201ENST00000452483 547 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.75□□□□□ -1.65
HERVK_113P62684 PCBP2P3-201ENST00000509726 843 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 AC006499.6-201ENST00000511169 607 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.75□□□□□ -1.65
HERVK_113P62684 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.75□□□□□ -1.65
HERVK_113P62684 TRMT10BP1-201ENST00000519377 943 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 AP003072.2-201ENST00000527756 676 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.75□□□□□ -1.65
HERVK_113P62684 MIR4795-201ENST00000584182 89 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 AC008638.3-201ENST00000603341 463 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 uc_338.12-201ENST00000616344 181 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 AC233309.1-201ENST00000619522 751 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 AC019278.1-201ENST00000623516 479 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.75□□□□□ -1.65
HERVK_113P62684 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 MTND4P23-201ENST00000447723 1363 ntBASIC4.75□□□□□ -1.65
HERVK_113P62684 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HERVK_113P62684 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms