Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HMGB3P23-201ENST00000414981 585 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 AL139247.1-201ENST00000422768 325 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN20P56880 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN20P56880 FTH1P1-201ENST00000437933 532 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CLDN20P56880 AC073614.1-201ENST00000438690 650 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 RABEPKP1-201ENST00000440529 1026 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN20P56880 TPT1P14-201ENST00000448018 505 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 AL136097.1-201ENST00000456945 913 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.42□□□□□ -1.86
CLDN20P56880 U8.18-201ENST00000459285 133 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 MTND1P3-201ENST00000484956 952 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 HMGB1P22-201ENST00000505315 124 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 PCBP2P3-201ENST00000509726 843 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 RAC1P2-201ENST00000511164 579 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.42□□□□□ -1.86
CLDN20P56880 RNA5SP208-201ENST00000516156 78 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 Y_RNA.672-201ENST00000516289 104 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 SNORA18.6-201ENST00000516792 115 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 RN7SKP60-201ENST00000516985 239 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 RNU2-46P-201ENST00000517038 113 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN20P56880 AP003181.2-201ENST00000528941 181 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN20P56880 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN20P56880 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.42□□□□□ -1.86
CLDN20P56880 AC090877.1-201ENST00000561418 344 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 MIR4738-201ENST00000579134 87 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 COX6CP3-201ENST00000580869 223 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.42□□□□□ -1.86
CLDN20P56880 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.42□□□□□ -1.86
CLDN20P56880 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.42□□□□□ -1.86
CLDN20P56880 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN20P56880 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN20P56880 AP001429.1-201ENST00000602568 530 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 AL049634.3-201ENST00000604968 457 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 AC004908.2-201ENST00000609090 574 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 AC108747.1-201ENST00000609508 535 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN20P56880 AC079684.1-201ENST00000621405 437 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 AL353748.2-201ENST00000622148 471 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 AL138713.1-201ENST00000624026 2130 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 AL159972.1-201ENST00000625150 448 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 PISRT1-201ENST00000626175 531 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 AC084035.1-201ENST00000634543 607 ntBASIC3.42□□□□□ -1.86
CLDN20P56880 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CLDN20P56880 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.42□□□□□ -1.86
CLDN20P56880 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLDN20P56880 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
CLDN20P56880 AC106871.1-201ENST00000568324 3102 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN20P56880 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN20P56880 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN20P56880 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN20P56880 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN20P56880 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN20P56880 SNORA7.2-201ENST00000364446 145 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN20P56880 RNU6-1181P-201ENST00000384191 106 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 Y_RNA.517-201ENST00000384551 106 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN20P56880 MRPL42P2-201ENST00000403169 426 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.41□□□□□ -1.86
CLDN20P56880 RNU2-8P-201ENST00000410727 190 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 RNU6-516P-201ENST00000411381 104 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 TOMM22P1-201ENST00000418578 312 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 ZNF885P-201ENST00000420174 1098 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN20P56880 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN20P56880 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN20P56880 AC007389.2-201ENST00000434630 306 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 AC009961.2-201ENST00000435771 251 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 RPL35AP22-201ENST00000436855 335 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLDN20P56880 SNORA71B-202ENST00000439232 272 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 NOTCH2P1-201ENST00000443481 624 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 GAPDHP17-201ENST00000449858 1001 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 RPS24P6-201ENST00000452670 400 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN20P56880 AC096751.1-202ENST00000502691 1067 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.41□□□□□ -1.86
CLDN20P56880 AC022483.1-201ENST00000514020 567 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 HMGN1P28-201ENST00000521340 364 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 AP003392.2-201ENST00000527269 208 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 OR4T1P-201ENST00000554933 911 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.41□□□□□ -1.86
CLDN20P56880 MIR1254-2-201ENST00000579553 63 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 MIR3146-201ENST00000580367 79 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.41□□□□□ -1.86
CLDN20P56880 DUXAP4-201ENST00000603046 613 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 AC007038.2-201ENST00000608095 740 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 AC091304.9-201ENST00000612091 226 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 AC090970.3-201ENST00000612566 866 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 AC008498.1-201ENST00000613012 531 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 AL121772.2-201ENST00000614331 297 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 AC015967.1-201ENST00000619893 476 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.41□□□□□ -1.86
CLDN20P56880 AC092628.2-201ENST00000622492 339 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 262.2 ms