Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SKINT1L-201ENST00000401057 817 ntBASIC3.37□□□□□ -1.87
CDH13P55290 RPL7P8-201ENST00000411964 730 ntBASIC3.37□□□□□ -1.87
CDH13P55290 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH13P55290 YPEL5P1-201ENST00000419731 367 ntBASIC3.37□□□□□ -1.87
CDH13P55290 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH13P55290 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH13P55290 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH13P55290 TPT1P14-201ENST00000448018 505 ntBASIC3.37□□□□□ -1.87
CDH13P55290 RPL36AP33-201ENST00000450395 310 ntBASIC3.37□□□□□ -1.87
CDH13P55290 RPS4XP2-201ENST00000458402 793 ntBASIC3.37□□□□□ -1.87
CDH13P55290 MTND3P7-201ENST00000474435 343 ntBASIC3.37□□□□□ -1.87
CDH13P55290 HSPE1P6-201ENST00000479457 291 ntBASIC3.37□□□□□ -1.87
CDH13P55290 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH13P55290 AC055855.1-201ENST00000489563 579 ntBASIC3.37□□□□□ -1.87
CDH13P55290 DSTNP2-201ENST00000504533 515 ntBASIC3.37□□□□□ -1.87
CDH13P55290 CBX3P3-201ENST00000508108 532 ntBASIC3.37□□□□□ -1.87
CDH13P55290 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH13P55290 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH13P55290 AC116347.2-201ENST00000514912 523 ntBASIC3.37□□□□□ -1.87
CDH13P55290 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH13P55290 FAM60DP-201ENST00000524174 632 ntBASIC3.37□□□□□ -1.87
CDH13P55290 AL133271.1-201ENST00000538229 291 ntBASIC3.37□□□□□ -1.87
CDH13P55290 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.37□□□□□ -1.87
CDH13P55290 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH13P55290 AL845331.3-202ENST00000562856 261 ntBASIC3.37□□□□□ -1.87
CDH13P55290 AC055876.1-202ENST00000567053 138 ntBASIC3.37□□□□□ -1.87
CDH13P55290 AC083760.1-201ENST00000589621 670 ntBASIC3.37□□□□□ -1.87
CDH13P55290 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH13P55290 AC068790.3-201ENST00000602988 553 ntBASIC3.37□□□□□ -1.87
CDH13P55290 Z99497.2-201ENST00000603634 310 ntBASIC3.37□□□□□ -1.87
CDH13P55290 AC010591.1-201ENST00000603941 649 ntBASIC3.37□□□□□ -1.87
CDH13P55290 AL022161.1-201ENST00000604390 213 ntBASIC3.37□□□□□ -1.87
CDH13P55290 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH13P55290 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CDH13P55290 MIR3974-201ENST00000637126 96 ntBASIC3.37□□□□□ -1.87
CDH13P55290 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH13P55290 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.37□□□□□ -1.87
CDH13P55290 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH13P55290 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH13P55290 PABPC1P9-201ENST00000426076 1612 ntBASIC3.37□□□□□ -1.87
CDH13P55290 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH13P55290 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH13P55290 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CDH13P55290 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH13P55290 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH13P55290 AC032011.1-201ENST00000611703 1549 ntBASIC3.36□□□□□ -1.87
CDH13P55290 RNA5SP479-201ENST00000364858 117 ntBASIC3.36□□□□□ -1.87
CDH13P55290 SNORD115.1-201ENST00000391109 76 ntBASIC3.36□□□□□ -1.87
CDH13P55290 AL591034.1-201ENST00000407447 340 ntBASIC3.36□□□□□ -1.87
CDH13P55290 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH13P55290 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH13P55290 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH13P55290 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH13P55290 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH13P55290 KATNBL1P6-201ENST00000453433 915 ntBASIC3.36□□□□□ -1.87
CDH13P55290 U3.44-201ENST00000458938 192 ntBASIC3.36□□□□□ -1.87
CDH13P55290 RPS4XP22-201ENST00000480755 780 ntBASIC3.36□□□□□ -1.87
CDH13P55290 AC135721.1-201ENST00000497954 479 ntBASIC3.36□□□□□ -1.87
CDH13P55290 AC112204.1-201ENST00000502591 103 ntBASIC3.36□□□□□ -1.87
CDH13P55290 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH13P55290 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.36□□□□□ -1.87
CDH13P55290 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.36□□□□□ -1.87
CDH13P55290 AC010486.3-201ENST00000511602 785 ntBASIC3.36□□□□□ -1.87
CDH13P55290 AC108043.1-201ENST00000512696 574 ntBASIC3.36□□□□□ -1.87
CDH13P55290 RNU6-798P-201ENST00000516912 103 ntBASIC3.36□□□□□ -1.87
CDH13P55290 RNU6-201P-201ENST00000517100 61 ntBASIC3.36□□□□□ -1.87
CDH13P55290 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH13P55290 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDH13P55290 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH13P55290 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH13P55290 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.36□□□□□ -1.87
CDH13P55290 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH13P55290 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH13P55290 ROCK1P1-201ENST00000573767 549 ntBASIC3.36□□□□□ -1.87
CDH13P55290 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH13P55290 COX6CP3-201ENST00000580869 223 ntBASIC3.36□□□□□ -1.87
CDH13P55290 AF131215.7-201ENST00000602443 707 ntBASIC3.36□□□□□ -1.87
CDH13P55290 AC011468.4-201ENST00000603942 409 ntBASIC3.36□□□□□ -1.87
CDH13P55290 AC106900.2-201ENST00000604994 317 ntBASIC3.36□□□□□ -1.87
CDH13P55290 OR10AB1P-201ENST00000609613 938 ntBASIC3.36□□□□□ -1.87
CDH13P55290 AL390240.1-201ENST00000612950 384 ntBASIC3.36□□□□□ -1.87
CDH13P55290 AC022079.1-201ENST00000621546 602 ntBASIC3.36□□□□□ -1.87
CDH13P55290 AC091931.1-201ENST00000623488 728 ntBASIC3.36□□□□□ -1.87
CDH13P55290 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH13P55290 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH13P55290 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDH13P55290 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
CDH13P55290 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH13P55290 AL136164.4-201ENST00000625013 2135 ntBASIC3.35□□□□□ -1.87
CDH13P55290 ZNF833P-201ENST00000424938 1494 ntBASIC3.35□□□□□ -1.87
CDH13P55290 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CDH13P55290 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH13P55290 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDH13P55290 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH13P55290 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CDH13P55290 AC005183.1-201ENST00000603687 1979 ntBASIC3.35□□□□□ -1.87
CDH13P55290 Y_RNA.46-201ENST00000362695 102 ntBASIC3.35□□□□□ -1.87
CDH13P55290 SNORA36C-201ENST00000384289 132 ntBASIC3.35□□□□□ -1.87
CDH13P55290 MIR19A-201ENST00000384878 82 ntBASIC3.35□□□□□ -1.87
CDH13P55290 RPL7P25-201ENST00000404151 721 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms