Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH11P55287 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH11P55287 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDH11P55287 RNU6-335P-201ENST00000364563 113 ntBASIC3.3□□□□□ -1.88
CDH11P55287 Y_RNA.359-201ENST00000365498 102 ntBASIC3.3□□□□□ -1.88
CDH11P55287 U8.11-201ENST00000384699 133 ntBASIC3.3□□□□□ -1.88
CDH11P55287 U8.12-201ENST00000384701 133 ntBASIC3.3□□□□□ -1.88
CDH11P55287 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CDH11P55287 U3.20-201ENST00000390909 217 ntBASIC3.3□□□□□ -1.88
CDH11P55287 RPL21P17-201ENST00000397467 475 ntBASIC3.3□□□□□ -1.88
CDH11P55287 Y_RNA.598-201ENST00000410480 95 ntBASIC3.3□□□□□ -1.88
CDH11P55287 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH11P55287 RAB9AP3-201ENST00000412737 573 ntBASIC3.3□□□□□ -1.88
CDH11P55287 AC007390.1-201ENST00000415722 356 ntBASIC3.3□□□□□ -1.88
CDH11P55287 AC099677.1-201ENST00000420575 175 ntBASIC3.3□□□□□ -1.88
CDH11P55287 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDH11P55287 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH11P55287 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH11P55287 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH11P55287 AL049734.2-201ENST00000441066 616 ntBASIC3.3□□□□□ -1.88
CDH11P55287 TXNP1-201ENST00000441872 371 ntBASIC3.3□□□□□ -1.88
CDH11P55287 AC112653.1-201ENST00000443851 386 ntBASIC3.3□□□□□ -1.88
CDH11P55287 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH11P55287 RAB9AP1-201ENST00000449393 573 ntBASIC3.3□□□□□ -1.88
CDH11P55287 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH11P55287 SNRPFP4-201ENST00000456366 242 ntBASIC3.3□□□□□ -1.88
CDH11P55287 TPT1P7-201ENST00000458300 517 ntBASIC3.3□□□□□ -1.88
CDH11P55287 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH11P55287 U8.18-201ENST00000459285 133 ntBASIC3.3□□□□□ -1.88
CDH11P55287 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH11P55287 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.3□□□□□ -1.88
CDH11P55287 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH11P55287 AC112204.1-201ENST00000502591 103 ntBASIC3.3□□□□□ -1.88
CDH11P55287 UBE2CP3-201ENST00000502715 450 ntBASIC3.3□□□□□ -1.88
CDH11P55287 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.3□□□□□ -1.88
CDH11P55287 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.3□□□□□ -1.88
CDH11P55287 SCARNA14-201ENST00000516903 136 ntBASIC3.3□□□□□ -1.88
CDH11P55287 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH11P55287 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH11P55287 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.3□□□□□ -1.88
CDH11P55287 AC126177.3-201ENST00000551839 688 ntBASIC3.3□□□□□ -1.88
CDH11P55287 AL121603.1-201ENST00000553815 142 ntBASIC3.3□□□□□ -1.88
CDH11P55287 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH11P55287 AC087481.2-201ENST00000565492 330 ntBASIC3.3□□□□□ -1.88
CDH11P55287 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH11P55287 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH11P55287 MIR4444-1-201ENST00000581696 74 ntBASIC3.3□□□□□ -1.88
CDH11P55287 MIR4444-2-201ENST00000584390 74 ntBASIC3.3□□□□□ -1.88
CDH11P55287 MIR3611-201ENST00000584484 83 ntBASIC3.3□□□□□ -1.88
CDH11P55287 AC009977.1-201ENST00000586015 570 ntBASIC3.3□□□□□ -1.88
CDH11P55287 AC010928.3-201ENST00000587712 541 ntBASIC3.3□□□□□ -1.88
CDH11P55287 SNRPGP15-201ENST00000600149 222 ntBASIC3.3□□□□□ -1.88
CDH11P55287 SNORA51-201ENST00000606420 132 ntBASIC3.3□□□□□ -1.88
CDH11P55287 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH11P55287 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.3□□□□□ -1.88
CDH11P55287 AL034408.1-202ENST00000636088 415 ntBASIC3.3□□□□□ -1.88
CDH11P55287 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
CDH11P55287 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH11P55287 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.3□□□□□ -1.88
CDH11P55287 MFSD8-236ENST00000641509 4050 ntBASIC3.3□□□□□ -1.88
CDH11P55287 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH11P55287 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH11P55287 AC092125.1-201ENST00000562568 1995 ntBASIC3.29□□□□□ -1.88
CDH11P55287 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH11P55287 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH11P55287 FRG1BP-201ENST00000278882 761 ntBASIC3.29□□□□□ -1.88
CDH11P55287 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH11P55287 RNA5SP42-201ENST00000364278 115 ntBASIC3.29□□□□□ -1.88
CDH11P55287 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.29□□□□□ -1.88
CDH11P55287 SNORA5A-201ENST00000384111 134 ntBASIC3.29□□□□□ -1.88
CDH11P55287 RNU6-114P-201ENST00000384704 105 ntBASIC3.29□□□□□ -1.88
CDH11P55287 MIR135A2-201ENST00000384854 100 ntBASIC3.29□□□□□ -1.88
CDH11P55287 AL138880.1-201ENST00000405824 642 ntBASIC3.29□□□□□ -1.88
CDH11P55287 AL353777.1-201ENST00000425552 326 ntBASIC3.29□□□□□ -1.88
CDH11P55287 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH11P55287 MRPS31P2-201ENST00000451581 518 ntBASIC3.29□□□□□ -1.88
CDH11P55287 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH11P55287 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.29□□□□□ -1.88
CDH11P55287 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.29□□□□□ -1.88
CDH11P55287 AL133162.1-201ENST00000463228 453 ntBASIC3.29□□□□□ -1.88
CDH11P55287 SNRPGP3-201ENST00000469405 227 ntBASIC3.29□□□□□ -1.88
CDH11P55287 AC055855.1-201ENST00000489563 579 ntBASIC3.29□□□□□ -1.88
CDH11P55287 FCF1P3-201ENST00000496394 590 ntBASIC3.29□□□□□ -1.88
CDH11P55287 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH11P55287 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH11P55287 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH11P55287 RNU1-95P-201ENST00000516357 160 ntBASIC3.29□□□□□ -1.88
CDH11P55287 RNU1-128P-201ENST00000516704 160 ntBASIC3.29□□□□□ -1.88
CDH11P55287 AC026403.1-201ENST00000518938 295 ntBASIC3.29□□□□□ -1.88
CDH11P55287 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDH11P55287 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH11P55287 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.29□□□□□ -1.88
CDH11P55287 AC012213.3-201ENST00000577199 777 ntBASIC3.29□□□□□ -1.88
CDH11P55287 AC006270.2-201ENST00000578523 652 ntBASIC3.29□□□□□ -1.88
CDH11P55287 AC060771.1-201ENST00000582031 164 ntBASIC3.29□□□□□ -1.88
CDH11P55287 AL391813.2-201ENST00000609113 322 ntBASIC3.29□□□□□ -1.88
CDH11P55287 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDH11P55287 AC009159.1-201ENST00000618386 642 ntBASIC3.29□□□□□ -1.88
CDH11P55287 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH11P55287 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms