Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC138749.5-201ENST00000611461 208 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 AC131902.3-201ENST00000611767 581 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 Z99129.1-201ENST00000612510 255 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 AC116165.2-201ENST00000616705 206 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 XIST_intron.1-201ENST00000619444 68 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.6□□□□□ -1.83
CLCNKAP51800 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.6□□□□□ -1.83
CLCNKAP51800 AC009093.8-201ENST00000641769 292 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLCNKAP51800 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CLCNKAP51800 MTND4P5-201ENST00000435821 1374 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 AC092125.1-201ENST00000562568 1995 ntBASIC3.6□□□□□ -1.83
CLCNKAP51800 PRO1804-201ENST00000623780 2050 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.59□□□□□ -1.83
CLCNKAP51800 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLCNKAP51800 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.59□□□□□ -1.83
CLCNKAP51800 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLCNKAP51800 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLCNKAP51800 Y_RNA.46-201ENST00000362695 102 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 RNA5SP119-201ENST00000362715 117 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 MIR23B-201ENST00000384832 97 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 RNU6-248P-201ENST00000410720 107 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 HMGB3P20-201ENST00000417997 600 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 AIMP1P1-201ENST00000418670 937 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 CYCSP4-201ENST00000429682 331 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.59□□□□□ -1.83
CLCNKAP51800 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.59□□□□□ -1.83
CLCNKAP51800 SKP1P1-201ENST00000438081 489 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 RPL22P17-201ENST00000438729 315 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 AL662791.1-201ENST00000441992 928 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 SNRPFP4-201ENST00000456366 242 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.59□□□□□ -1.83
CLCNKAP51800 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.59□□□□□ -1.83
CLCNKAP51800 SNORD42A-201ENST00000459584 64 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 AL049830.2-201ENST00000480072 201 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 AC011825.1-201ENST00000484967 388 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 RPL23AP55-201ENST00000498163 452 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 AC112204.1-201ENST00000502591 103 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.59□□□□□ -1.83
CLCNKAP51800 AC021146.1-201ENST00000511202 716 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 RNU6-1003P-201ENST00000517099 105 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLCNKAP51800 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.59□□□□□ -1.83
CLCNKAP51800 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.59□□□□□ -1.83
CLCNKAP51800 ZNF415P1-201ENST00000582279 1166 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 AC009977.1-201ENST00000586015 570 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 AL589743.7-201ENST00000612637 233 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 AC008498.1-201ENST00000613012 531 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 AC018755.4-201ENST00000619715 454 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.59□□□□□ -1.83
CLCNKAP51800 AC099654.13-201ENST00000639774 207 ntBASIC3.59□□□□□ -1.83
CLCNKAP51800 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLCNKAP51800 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
CLCNKAP51800 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.59□□□□□ -1.84
CLCNKAP51800 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
CLCNKAP51800 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.59□□□□□ -1.84
CLCNKAP51800 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.58□□□□□ -1.84
CLCNKAP51800 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.58□□□□□ -1.84
CLCNKAP51800 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLCNKAP51800 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.58□□□□□ -1.84
CLCNKAP51800 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLCNKAP51800 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 AC006504.1-201ENST00000562493 3666 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLCNKAP51800 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCNKAP51800 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CLCNKAP51800 HMGN2P8-201ENST00000391458 268 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 HSPE1P8-201ENST00000406997 288 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCNKAP51800 AL359704.1-201ENST00000411586 781 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.58□□□□□ -1.84
CLCNKAP51800 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCNKAP51800 MRPS18BP2-201ENST00000434310 759 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CLCNKAP51800 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCNKAP51800 AC010655.1-201ENST00000449336 292 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCNKAP51800 AL033528.1-201ENST00000453780 140 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 AC104308.1-201ENST00000454621 333 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 HMGN2P16-201ENST00000456802 261 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 snoU13.3-201ENST00000459441 104 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 KLF3P2-201ENST00000465138 268 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 SLC25A15P5-201ENST00000508033 253 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 AC104619.4-201ENST00000510773 249 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.58□□□□□ -1.84
CLCNKAP51800 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.58□□□□□ -1.84
CLCNKAP51800 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCNKAP51800 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCNKAP51800 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.58□□□□□ -1.84
CLCNKAP51800 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.58□□□□□ -1.84
CLCNKAP51800 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.58□□□□□ -1.84
CLCNKAP51800 UBE2L4-201ENST00000587688 464 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 DEFB131E-202ENST00000602581 683 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 AC073648.5-201ENST00000603502 305 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 AC091805.2-201ENST00000603848 235 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 AC011468.4-201ENST00000603942 409 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.58□□□□□ -1.84
CLCNKAP51800 AL158801.5-201ENST00000623123 465 ntBASIC3.58□□□□□ -1.84
CLCNKAP51800 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms