Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 AC010587.2-201ENST00000511727 448 ntBASIC2.6□□□□□ -1.99
LHX2P50458 RNU1-103P-201ENST00000516502 125 ntBASIC2.6□□□□□ -1.99
LHX2P50458 EEF1A1P37-201ENST00000522748 715 ntBASIC2.6□□□□□ -1.99
LHX2P50458 AC239860.2-201ENST00000525886 270 ntBASIC2.6□□□□□ -1.99
LHX2P50458 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.6□□□□□ -1.99
LHX2P50458 AC007536.1-201ENST00000533382 349 ntBASIC2.6□□□□□ -1.99
LHX2P50458 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
LHX2P50458 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.6□□□□□ -1.99
LHX2P50458 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.6□□□□□ -1.99
LHX2P50458 AC087465.1-201ENST00000560574 245 ntBASIC2.6□□□□□ -1.99
LHX2P50458 AL512347.1-201ENST00000566420 503 ntBASIC2.6□□□□□ -1.99
LHX2P50458 AC010653.1-201ENST00000571108 881 ntBASIC2.6□□□□□ -1.99
LHX2P50458 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.6□□□□□ -1.99
LHX2P50458 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.6□□□□□ -1.99
LHX2P50458 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
LHX2P50458 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.6□□□□□ -1.99
LHX2P50458 AL109653.1-201ENST00000603091 248 ntBASIC2.6□□□□□ -1.99
LHX2P50458 AL592221.1-201ENST00000605266 382 ntBASIC2.6□□□□□ -1.99
LHX2P50458 MIR7106-201ENST00000612419 65 ntBASIC2.6□□□□□ -1.99
LHX2P50458 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.6□□□□□ -1.99
LHX2P50458 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
LHX2P50458 AP000484.1-201ENST00000620067 1252 ntBASIC2.6□□□□□ -1.99
LHX2P50458 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.6□□□□□ -1.99
LHX2P50458 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LHX2P50458 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
LHX2P50458 AP002907.1-201ENST00000606361 1430 ntBASIC2.59□□□□□ -1.99
LHX2P50458 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
LHX2P50458 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
LHX2P50458 FAM133CP-201ENST00000332869 704 ntBASIC2.59□□□□□ -1.99
LHX2P50458 RNU6-878P-201ENST00000384578 110 ntBASIC2.59□□□□□ -1.99
LHX2P50458 RNU6-821P-201ENST00000390995 107 ntBASIC2.59□□□□□ -1.99
LHX2P50458 RNU1-101P-201ENST00000391171 127 ntBASIC2.59□□□□□ -1.99
LHX2P50458 HIGD1AP15-201ENST00000416198 280 ntBASIC2.59□□□□□ -1.99
LHX2P50458 AL645937.1-202ENST00000421799 937 ntBASIC2.59□□□□□ -1.99
LHX2P50458 DUTP6-201ENST00000425573 462 ntBASIC2.59□□□□□ -1.99
LHX2P50458 MTND1P32-201ENST00000433043 938 ntBASIC2.59□□□□□ -1.99
LHX2P50458 RPS20P5-201ENST00000434808 360 ntBASIC2.59□□□□□ -1.99
LHX2P50458 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.59□□□□□ -1.99
LHX2P50458 AC093156.1-201ENST00000440382 670 ntBASIC2.59□□□□□ -1.99
LHX2P50458 HMGB1P25-201ENST00000468402 607 ntBASIC2.59□□□□□ -1.99
LHX2P50458 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LHX2P50458 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.59□□□□□ -1.99
LHX2P50458 AC006499.2-201ENST00000513470 337 ntBASIC2.59□□□□□ -1.99
LHX2P50458 MTCO2P32-201ENST00000514865 403 ntBASIC2.59□□□□□ -1.99
LHX2P50458 RN7SKP43-201ENST00000516173 320 ntBASIC2.59□□□□□ -1.99
LHX2P50458 RN7SKP287-201ENST00000516546 266 ntBASIC2.59□□□□□ -1.99
LHX2P50458 SCARNA13-201ENST00000516672 275 ntBASIC2.59□□□□□ -1.99
LHX2P50458 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.59□□□□□ -1.99
LHX2P50458 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.59□□□□□ -1.99
LHX2P50458 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
LHX2P50458 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.59□□□□□ -1.99
LHX2P50458 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.59□□□□□ -1.99
LHX2P50458 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.59□□□□□ -1.99
LHX2P50458 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.59□□□□□ -1.99
LHX2P50458 DUXAP1-201ENST00000556632 463 ntBASIC2.59□□□□□ -1.99
LHX2P50458 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.59□□□□□ -1.99
LHX2P50458 AC009712.1-201ENST00000564938 316 ntBASIC2.59□□□□□ -1.99
LHX2P50458 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.59□□□□□ -1.99
LHX2P50458 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.59□□□□□ -1.99
LHX2P50458 AC024153.1-201ENST00000603103 365 ntBASIC2.59□□□□□ -1.99
LHX2P50458 AC093424.1-201ENST00000604999 338 ntBASIC2.59□□□□□ -1.99
LHX2P50458 AL158042.1-201ENST00000605338 460 ntBASIC2.59□□□□□ -1.99
LHX2P50458 AC080013.4-201ENST00000607624 649 ntBASIC2.59□□□□□ -1.99
LHX2P50458 AC006329.2-201ENST00000611491 394 ntBASIC2.59□□□□□ -1.99
LHX2P50458 AL390240.1-201ENST00000612950 384 ntBASIC2.59□□□□□ -1.99
LHX2P50458 AC040168.1-201ENST00000623594 991 ntBASIC2.59□□□□□ -1.99
LHX2P50458 AC231657.1-201ENST00000624313 397 ntBASIC2.59□□□□□ -1.99
LHX2P50458 AC091925.2-201ENST00000625059 256 ntBASIC2.59□□□□□ -1.99
LHX2P50458 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.59□□□□□ -1.99
LHX2P50458 AC084035.1-201ENST00000634543 607 ntBASIC2.59□□□□□ -1.99
LHX2P50458 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.59□□□□□ -1.99
LHX2P50458 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.59□□□□□ -1.99
LHX2P50458 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.59□□□□□ -2
LHX2P50458 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.59□□□□□ -2
LHX2P50458 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
LHX2P50458 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.58□□□□□ -2
LHX2P50458 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.58□□□□□ -2
LHX2P50458 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LHX2P50458 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.58□□□□□ -2
LHX2P50458 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LHX2P50458 RNA5SP258-201ENST00000362750 119 ntBASIC2.58□□□□□ -2
LHX2P50458 RNU6-629P-201ENST00000384061 103 ntBASIC2.58□□□□□ -2
LHX2P50458 SNORA18.3-201ENST00000384122 132 ntBASIC2.58□□□□□ -2
LHX2P50458 RNU6-837P-201ENST00000391056 108 ntBASIC2.58□□□□□ -2
LHX2P50458 RPL23AP29-201ENST00000397284 453 ntBASIC2.58□□□□□ -2
LHX2P50458 DHFRP6-201ENST00000401776 268 ntBASIC2.58□□□□□ -2
LHX2P50458 HMGB1P17-201ENST00000403495 628 ntBASIC2.58□□□□□ -2
LHX2P50458 MIR1284-201ENST00000408337 120 ntBASIC2.58□□□□□ -2
LHX2P50458 RNU6-757P-201ENST00000410334 100 ntBASIC2.58□□□□□ -2
LHX2P50458 RN7SKP58-201ENST00000411010 305 ntBASIC2.58□□□□□ -2
LHX2P50458 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.58□□□□□ -2
LHX2P50458 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.58□□□□□ -2
LHX2P50458 MTCO2P21-201ENST00000419780 677 ntBASIC2.58□□□□□ -2
LHX2P50458 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
LHX2P50458 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
LHX2P50458 PSMA6P3-201ENST00000428242 164 ntBASIC2.58□□□□□ -2
LHX2P50458 AL591719.1-201ENST00000444669 744 ntBASIC2.58□□□□□ -2
LHX2P50458 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.58□□□□□ -2
LHX2P50458 NIPA2P5-201ENST00000452282 464 ntBASIC2.58□□□□□ -2
LHX2P50458 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms