Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA1P49639 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA1P49639 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
HOXA1P49639 AL672296.1-201ENST00000427780 2158 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
HOXA1P49639 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA1P49639 RNVU1-6-201ENST00000364688 164 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 RNY3P13-201ENST00000365542 102 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXA1P49639 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HOXA1P49639 RNU4-55P-201ENST00000410731 137 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXA1P49639 MTND3P17-201ENST00000416968 344 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXA1P49639 AC119618.1-201ENST00000434191 222 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.27□□□□□ -1.89
HOXA1P49639 TIMM9P1-201ENST00000436122 256 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA1P49639 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXA1P49639 RPL21P89-201ENST00000444021 467 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA1P49639 RPS17P13-201ENST00000448974 407 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA1P49639 AC010655.1-201ENST00000449336 292 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 PPIAP3-201ENST00000450588 505 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 AC146507.1-201ENST00000468335 354 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 AL121769.1-201ENST00000469473 401 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 AC004924.1-201ENST00000480160 781 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 RPS3AP50-201ENST00000487064 803 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 AC007686.1-201ENST00000488511 463 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 AC078817.1-201ENST00000492623 435 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA1P49639 PCBP2P3-201ENST00000509726 843 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA1P49639 RNA5SP49-201ENST00000516450 115 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 Vault.3-201ENST00000516676 95 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 RNA5SP337-201ENST00000517007 109 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA1P49639 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HOXA1P49639 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA1P49639 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.27□□□□□ -1.89
HOXA1P49639 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXA1P49639 AC234771.5-201ENST00000600161 514 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 AP001429.1-201ENST00000602568 530 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 AL355812.1-201ENST00000603215 216 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 AC011451.2-201ENST00000604303 598 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 AL031176.1-201ENST00000604554 466 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 AL158211.4-201ENST00000606988 584 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXA1P49639 AC107294.3-201ENST00000609211 526 ntBASIC3.27□□□□□ -1.89
HOXA1P49639 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXA1P49639 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA1P49639 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXA1P49639 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXA1P49639 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXA1P49639 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXA1P49639 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HOXA1P49639 AC116667.1-201ENST00000604855 2072 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HOXA1P49639 MAPK10-362ENST00000641864 4484 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXA1P49639 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HOXA1P49639 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXA1P49639 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
HOXA1P49639 ELF2P3-201ENST00000445099 1506 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 OR4G2P-201ENST00000328113 903 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXA1P49639 RNU6-181P-201ENST00000363225 107 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 RNU6-1078P-201ENST00000364522 103 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 RNU6-805P-201ENST00000365643 106 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 SNORA20.2-201ENST00000383922 131 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HOXA1P49639 RNA5SP293-201ENST00000410527 113 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 TOMM22P1-201ENST00000418578 312 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXA1P49639 MTCYBP5-201ENST00000423752 1135 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 AC012498.1-201ENST00000424037 437 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXA1P49639 AC073464.1-201ENST00000429823 534 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 MTCO2P11-201ENST00000431069 680 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 RPL23AP30-201ENST00000432419 501 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 AL596276.1-201ENST00000434465 418 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 UBE2V1P8-201ENST00000437166 265 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 CBX1P1-201ENST00000440184 427 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 AL359385.1-201ENST00000456509 365 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 RPL23AP24-201ENST00000458203 385 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 AC013267.1-201ENST00000458227 267 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXA1P49639 RPS7P7-201ENST00000463499 571 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 RPL7P5-201ENST00000471472 736 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 RN7SL271P-201ENST00000487601 295 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HOXA1P49639 KCTD9P5-201ENST00000504141 1170 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
HOXA1P49639 AC026726.1-201ENST00000512859 601 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 Y_RNA.704-201ENST00000516851 102 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 RNU6-445P-201ENST00000516949 107 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 AC022616.3-201ENST00000523940 148 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 AP004242.1-201ENST00000533701 349 ntBASIC3.26□□□□□ -1.89
HOXA1P49639 AK6P1-201ENST00000540219 478 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms