Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 AC123767.1-202ENST00000620407 817 ntBASIC2.67□□□□□ -1.98
RFX3P48380 AC104985.3-201ENST00000623479 597 ntBASIC2.67□□□□□ -1.98
RFX3P48380 AC090772.4-201ENST00000623599 362 ntBASIC2.67□□□□□ -1.98
RFX3P48380 AC013437.2-201ENST00000639587 677 ntBASIC2.67□□□□□ -1.98
RFX3P48380 AC092447.7-201ENST00000422212 1621 ntBASIC2.67□□□□□ -1.98
RFX3P48380 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RFX3P48380 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RFX3P48380 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RFX3P48380 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
RFX3P48380 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.67□□□□□ -1.98
RFX3P48380 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
RFX3P48380 CDR1-202ENST00000625883 1485 ntBASIC2.66□□□□□ -1.98
RFX3P48380 FRG1BP-201ENST00000278882 761 ntBASIC2.66□□□□□ -1.98
RFX3P48380 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
RFX3P48380 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
RFX3P48380 SNORA48.2-201ENST00000390926 124 ntBASIC2.66□□□□□ -1.98
RFX3P48380 SNORA26.7-201ENST00000391288 122 ntBASIC2.66□□□□□ -1.98
RFX3P48380 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
RFX3P48380 RPL21P75-201ENST00000396599 483 ntBASIC2.66□□□□□ -1.98
RFX3P48380 UBA52P6-201ENST00000399822 382 ntBASIC2.66□□□□□ -1.98
RFX3P48380 RPL21P28-201ENST00000401418 483 ntBASIC2.66□□□□□ -1.98
RFX3P48380 AL592114.1-201ENST00000403842 483 ntBASIC2.66□□□□□ -1.98
RFX3P48380 MRPS36P1-201ENST00000421291 307 ntBASIC2.66□□□□□ -1.98
RFX3P48380 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.66□□□□□ -1.98
RFX3P48380 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.66□□□□□ -1.98
RFX3P48380 GTF2IP3-201ENST00000433887 494 ntBASIC2.66□□□□□ -1.98
RFX3P48380 AC092427.1-201ENST00000439177 601 ntBASIC2.66□□□□□ -1.98
RFX3P48380 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.66□□□□□ -1.98
RFX3P48380 AL592447.1-201ENST00000447592 540 ntBASIC2.66□□□□□ -1.98
RFX3P48380 NIPA2P5-201ENST00000452282 464 ntBASIC2.66□□□□□ -1.98
RFX3P48380 RPL21P39-201ENST00000463605 483 ntBASIC2.66□□□□□ -1.98
RFX3P48380 S100A11P2-201ENST00000467589 312 ntBASIC2.66□□□□□ -1.98
RFX3P48380 AC011979.1-201ENST00000472300 483 ntBASIC2.66□□□□□ -1.98
RFX3P48380 RPL21P93-201ENST00000480465 489 ntBASIC2.66□□□□□ -1.98
RFX3P48380 AC233702.1-201ENST00000482905 502 ntBASIC2.66□□□□□ -1.98
RFX3P48380 RPS3AP14-201ENST00000483907 780 ntBASIC2.66□□□□□ -1.98
RFX3P48380 AC087190.1-201ENST00000484462 480 ntBASIC2.66□□□□□ -1.98
RFX3P48380 AC093591.1-201ENST00000491435 481 ntBASIC2.66□□□□□ -1.98
RFX3P48380 RPL21P16-201ENST00000495531 483 ntBASIC2.66□□□□□ -1.98
RFX3P48380 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.66□□□□□ -1.98
RFX3P48380 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RFX3P48380 AL359273.1-201ENST00000510918 627 ntBASIC2.66□□□□□ -1.98
RFX3P48380 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.66□□□□□ -1.98
RFX3P48380 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.66□□□□□ -1.98
RFX3P48380 MTND2P7-201ENST00000521337 640 ntBASIC2.66□□□□□ -1.98
RFX3P48380 AP000857.1-201ENST00000532151 543 ntBASIC2.66□□□□□ -1.98
RFX3P48380 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.66□□□□□ -1.98
RFX3P48380 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.66□□□□□ -1.98
RFX3P48380 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.66□□□□□ -1.98
RFX3P48380 MIR4637-201ENST00000582405 84 ntBASIC2.66□□□□□ -1.98
RFX3P48380 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.66□□□□□ -1.98
RFX3P48380 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.66□□□□□ -1.98
RFX3P48380 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.66□□□□□ -1.98
RFX3P48380 AL022067.1-201ENST00000602426 454 ntBASIC2.66□□□□□ -1.98
RFX3P48380 AC091057.2-201ENST00000602594 792 ntBASIC2.66□□□□□ -1.98
RFX3P48380 U73023.1-201ENST00000603134 700 ntBASIC2.66□□□□□ -1.98
RFX3P48380 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.66□□□□□ -1.98
RFX3P48380 AC009237.15-201ENST00000610252 501 ntBASIC2.66□□□□□ -1.98
RFX3P48380 TUG1_1.1-201ENST00000610654 145 ntBASIC2.66□□□□□ -1.98
RFX3P48380 AC023158.2-201ENST00000614876 543 ntBASIC2.66□□□□□ -1.98
RFX3P48380 AC006213.4-201ENST00000616184 634 ntBASIC2.66□□□□□ -1.98
RFX3P48380 AC084824.4-201ENST00000620106 731 ntBASIC2.66□□□□□ -1.98
RFX3P48380 AL049777.1-201ENST00000622740 518 ntBASIC2.66□□□□□ -1.98
RFX3P48380 AC120349.2-201ENST00000625002 298 ntBASIC2.66□□□□□ -1.98
RFX3P48380 SCARNA15.3-201ENST00000626315 122 ntBASIC2.66□□□□□ -1.98
RFX3P48380 SCARNA4.1-201ENST00000628597 123 ntBASIC2.66□□□□□ -1.98
RFX3P48380 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
RFX3P48380 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
RFX3P48380 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.65□□□□□ -1.98
RFX3P48380 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
RFX3P48380 RNU1-35P-201ENST00000362782 153 ntBASIC2.65□□□□□ -1.99
RFX3P48380 snoZ40.1-201ENST00000364540 72 ntBASIC2.65□□□□□ -1.99
RFX3P48380 MIR512-1-201ENST00000384913 84 ntBASIC2.65□□□□□ -1.99
RFX3P48380 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
RFX3P48380 AL592310.1-201ENST00000414330 671 ntBASIC2.65□□□□□ -1.99
RFX3P48380 OR4K6P-201ENST00000416478 897 ntBASIC2.65□□□□□ -1.99
RFX3P48380 RPL7P44-201ENST00000424827 742 ntBASIC2.65□□□□□ -1.99
RFX3P48380 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.65□□□□□ -1.99
RFX3P48380 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.65□□□□□ -1.99
RFX3P48380 MTCYBP45-201ENST00000435243 565 ntBASIC2.65□□□□□ -1.99
RFX3P48380 THAP5P1-201ENST00000439089 262 ntBASIC2.65□□□□□ -1.99
RFX3P48380 MTND2P20-201ENST00000440805 661 ntBASIC2.65□□□□□ -1.99
RFX3P48380 NANOGNBP1-201ENST00000448444 480 ntBASIC2.65□□□□□ -1.99
RFX3P48380 RSL24D1P3-201ENST00000449255 495 ntBASIC2.65□□□□□ -1.99
RFX3P48380 OFD1P3Y-201ENST00000453312 783 ntBASIC2.65□□□□□ -1.99
RFX3P48380 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.65□□□□□ -1.99
RFX3P48380 AL049829.1-201ENST00000465411 156 ntBASIC2.65□□□□□ -1.99
RFX3P48380 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
RFX3P48380 AC108734.3-201ENST00000481241 1165 ntBASIC2.65□□□□□ -1.99
RFX3P48380 RPL9P33-201ENST00000484311 566 ntBASIC2.65□□□□□ -1.99
RFX3P48380 AC090453.1-201ENST00000495560 436 ntBASIC2.65□□□□□ -1.99
RFX3P48380 TMEM251P1-201ENST00000503717 318 ntBASIC2.65□□□□□ -1.99
RFX3P48380 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.65□□□□□ -1.99
RFX3P48380 AC114322.1-201ENST00000506771 926 ntBASIC2.65□□□□□ -1.99
RFX3P48380 AC113347.3-201ENST00000509113 148 ntBASIC2.65□□□□□ -1.99
RFX3P48380 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.65□□□□□ -1.99
RFX3P48380 AC093752.1-206ENST00000511823 336 ntBASIC2.65□□□□□ -1.99
RFX3P48380 RNU6-1225P-201ENST00000516336 65 ntBASIC2.65□□□□□ -1.99
RFX3P48380 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.65□□□□□ -1.99
RFX3P48380 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms