Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA4P43681 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA4P43681 ADAM5-202ENST00000399789 1942 ntBASIC5.24□□□□□ -1.57
CHRNA4P43681 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA4P43681 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA4P43681 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.24□□□□□ -1.57
CHRNA4P43681 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA4P43681 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CHRNA4P43681 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.23□□□□□ -1.57
CHRNA4P43681 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.23□□□□□ -1.57
CHRNA4P43681 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
CHRNA4P43681 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.23□□□□□ -1.57
CHRNA4P43681 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA4P43681 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA4P43681 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CHRNA4P43681 AL022311.1-201ENST00000623726 19416 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA4P43681 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA4P43681 Y_RNA.240-201ENST00000364469 95 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CHRNA4P43681 Y_RNA.383-201ENST00000383855 97 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 RNU1-74P-201ENST00000384108 171 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CHRNA4P43681 SNORD115-46-201ENST00000390982 71 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 DUTP5-201ENST00000406790 469 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 U3.39-201ENST00000408569 239 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 SYF2P2-201ENST00000417620 583 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.23□□□□□ -1.57
CHRNA4P43681 AL590233.1-201ENST00000430017 456 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.23□□□□□ -1.57
CHRNA4P43681 GAPDHP58-201ENST00000438477 1006 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 RPS29P10-201ENST00000439197 166 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 RAC1P7-201ENST00000445367 377 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNA4P43681 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNA4P43681 RNU7-187P-201ENST00000458985 68 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 AC009127.1-201ENST00000467090 155 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 COX6CP14-201ENST00000469580 174 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 AC090602.1-201ENST00000469695 252 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 RPL7P47-201ENST00000497299 556 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CHRNA4P43681 AC108078.2-201ENST00000510750 236 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 RAB9BP1-201ENST00000519581 626 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNA4P43681 RANP3-201ENST00000530970 276 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 AC025423.5-201ENST00000550230 219 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 AC126177.3-201ENST00000551839 688 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 AC009852.2-201ENST00000567898 485 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 MIR3176-201ENST00000582210 90 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNA4P43681 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.23□□□□□ -1.57
CHRNA4P43681 MIR6730-201ENST00000622213 67 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.23□□□□□ -1.57
CHRNA4P43681 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CHRNA4P43681 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA4P43681 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA4P43681 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA4P43681 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA4P43681 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA4P43681 AC112198.2-201ENST00000426589 6996 ntBASIC5.23□□□□□ -1.57
CHRNA4P43681 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA4P43681 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA4P43681 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.23□□□□□ -1.57
CHRNA4P43681 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CHRNA4P43681 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA4P43681 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CHRNA4P43681 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
CHRNA4P43681 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.23□□□□□ -1.57
CHRNA4P43681 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.22□□□□□ -1.57
CHRNA4P43681 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA4P43681 AC006484.1-201ENST00000435086 1884 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA4P43681 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CHRNA4P43681 Y_RNA.16-201ENST00000362421 102 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 Y_RNA.76-201ENST00000362931 109 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 RNY1P16-201ENST00000363063 111 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CHRNA4P43681 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CHRNA4P43681 RNU6-393P-201ENST00000384475 107 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 RNU6ATAC15P-201ENST00000408279 121 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 RN7SKP16-201ENST00000410180 299 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 Y_RNA.626-201ENST00000411288 95 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 RPL19P1-201ENST00000411635 428 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 UBE2V1P4-201ENST00000425374 344 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 RPL35AP22-201ENST00000436855 335 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.22□□□□□ -1.57
CHRNA4P43681 OR2AO1P-201ENST00000476497 403 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.22□□□□□ -1.57
CHRNA4P43681 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.22□□□□□ -1.57
CHRNA4P43681 RPS21P4-201ENST00000487122 248 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.22□□□□□ -1.57
CHRNA4P43681 AL359273.1-201ENST00000510918 627 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 RNU2-69P-201ENST00000516061 100 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 RNU6-919P-201ENST00000516731 104 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.22□□□□□ -1.57
CHRNA4P43681 FAM60DP-201ENST00000524174 632 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 AP000859.1-201ENST00000525536 307 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
CHRNA4P43681 AC040958.1-201ENST00000561102 201 ntBASIC5.22□□□□□ -1.57
CHRNA4P43681 SULT1C2P2-201ENST00000562517 294 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms