Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
APOBEC1P41238 VN1R104P-201ENST00000505115 1009 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.39□□□□□ -1.87
APOBEC1P41238 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.39□□□□□ -1.87
APOBEC1P41238 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.39□□□□□ -1.87
APOBEC1P41238 RNA5SP208-201ENST00000516156 78 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 RNU6-352P-201ENST00000516908 107 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 DEFB108A-201ENST00000530110 222 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 AC125611.2-201ENST00000551907 647 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 CBX3P5-201ENST00000552017 521 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.39□□□□□ -1.87
APOBEC1P41238 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.39□□□□□ -1.87
APOBEC1P41238 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.39□□□□□ -1.87
APOBEC1P41238 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.39□□□□□ -1.87
APOBEC1P41238 VN1R79P-201ENST00000593540 513 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 AC146944.4-201ENST00000602697 718 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 AL049634.3-201ENST00000604968 457 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 uc_338.12-201ENST00000616344 181 ntBASIC3.39□□□□□ -1.87
APOBEC1P41238 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOBEC1P41238 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
APOBEC1P41238 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOBEC1P41238 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.39□□□□□ -1.87
APOBEC1P41238 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
APOBEC1P41238 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
APOBEC1P41238 AC005832.2-201ENST00000538921 1430 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 USP8P1-201ENST00000494673 3183 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
APOBEC1P41238 MIR423-201ENST00000362201 94 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 RNY4P16-201ENST00000364768 94 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 RPL23AP32-201ENST00000395315 459 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 AL109755.1-201ENST00000401791 649 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 MIR1193-201ENST00000408109 78 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 RN7SKP156-201ENST00000410308 342 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 RNU2-66P-201ENST00000410650 161 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
APOBEC1P41238 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.38□□□□□ -1.87
APOBEC1P41238 ISCA1P6-201ENST00000427740 390 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.38□□□□□ -1.87
APOBEC1P41238 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.38□□□□□ -1.87
APOBEC1P41238 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.38□□□□□ -1.87
APOBEC1P41238 MTND1P12-201ENST00000455231 147 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.38□□□□□ -1.87
APOBEC1P41238 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.38□□□□□ -1.87
APOBEC1P41238 RN7SL93P-201ENST00000463035 293 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 AC020893.1-201ENST00000502452 580 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 AC114967.1-201ENST00000504890 259 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 AC010587.1-201ENST00000505809 469 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.38□□□□□ -1.87
APOBEC1P41238 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.38□□□□□ -1.87
APOBEC1P41238 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.38□□□□□ -1.87
APOBEC1P41238 RNA5SP309-201ENST00000516670 106 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 DUXAP2-201ENST00000519198 589 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 MTCYBP20-201ENST00000524239 1129 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.38□□□□□ -1.87
APOBEC1P41238 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.38□□□□□ -1.87
APOBEC1P41238 MIR3913-1-201ENST00000577744 102 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 AC087499.8-201ENST00000578406 226 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 AC008277.2-201ENST00000605196 797 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 AC012443.1-201ENST00000605605 231 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 AC098614.4-201ENST00000607601 462 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
APOBEC1P41238 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 AC099842.1-201ENST00000619919 596 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 AC079684.1-201ENST00000621405 437 ntBASIC3.38□□□□□ -1.87
APOBEC1P41238 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
APOBEC1P41238 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
APOBEC1P41238 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.38□□□□□ -1.87
APOBEC1P41238 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
APOBEC1P41238 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.37□□□□□ -1.87
APOBEC1P41238 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBEC1P41238 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.37□□□□□ -1.87
APOBEC1P41238 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.37□□□□□ -1.87
APOBEC1P41238 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
APOBEC1P41238 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBEC1P41238 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.37□□□□□ -1.87
APOBEC1P41238 RNU6-600P-201ENST00000362524 99 ntBASIC3.37□□□□□ -1.87
APOBEC1P41238 RNU5E-8P-201ENST00000363502 116 ntBASIC3.37□□□□□ -1.87
APOBEC1P41238 RN7SKP280-201ENST00000364196 304 ntBASIC3.37□□□□□ -1.87
APOBEC1P41238 RNY3P13-201ENST00000365542 102 ntBASIC3.37□□□□□ -1.87
APOBEC1P41238 MIR3074-201ENST00000384885 81 ntBASIC3.37□□□□□ -1.87
APOBEC1P41238 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
APOBEC1P41238 Y_RNA.582-201ENST00000391023 95 ntBASIC3.37□□□□□ -1.87
APOBEC1P41238 RPS3AP36-201ENST00000398190 775 ntBASIC3.37□□□□□ -1.87
APOBEC1P41238 Z98941.1-201ENST00000407764 100 ntBASIC3.37□□□□□ -1.87
APOBEC1P41238 AC127391.1-201ENST00000411737 98 ntBASIC3.37□□□□□ -1.87
APOBEC1P41238 RHEBP3-201ENST00000411920 351 ntBASIC3.37□□□□□ -1.87
APOBEC1P41238 RPS15AP12-201ENST00000419498 388 ntBASIC3.37□□□□□ -1.87
APOBEC1P41238 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.37□□□□□ -1.87
APOBEC1P41238 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.37□□□□□ -1.87
APOBEC1P41238 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
APOBEC1P41238 AC019097.1-201ENST00000424783 735 ntBASIC3.37□□□□□ -1.87
APOBEC1P41238 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.37□□□□□ -1.87
APOBEC1P41238 AC137499.1-201ENST00000427602 88 ntBASIC3.37□□□□□ -1.87
APOBEC1P41238 AC010975.2-201ENST00000427781 588 ntBASIC3.37□□□□□ -1.87
APOBEC1P41238 AC024082.2-201ENST00000434771 238 ntBASIC3.37□□□□□ -1.87
APOBEC1P41238 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.37□□□□□ -1.87
APOBEC1P41238 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.37□□□□□ -1.87
APOBEC1P41238 USP9YP15-201ENST00000442391 422 ntBASIC3.37□□□□□ -1.87
APOBEC1P41238 ELOCP30-201ENST00000447108 299 ntBASIC3.37□□□□□ -1.87
APOBEC1P41238 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms