Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCNFP41002 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCNFP41002 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCNFP41002 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CCNFP41002 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCNFP41002 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCNFP41002 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCNFP41002 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.89□□□□□ -1.63
CCNFP41002 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCNFP41002 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCNFP41002 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCNFP41002 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCNFP41002 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.89□□□□□ -1.63
CCNFP41002 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.89□□□□□ -1.63
CCNFP41002 SNORA33.2-201ENST00000365413 134 ntBASIC4.89□□□□□ -1.63
CCNFP41002 Y_RNA.459-201ENST00000384251 102 ntBASIC4.89□□□□□ -1.63
CCNFP41002 RNU6-1127P-201ENST00000384580 107 ntBASIC4.89□□□□□ -1.63
CCNFP41002 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.89□□□□□ -1.63
CCNFP41002 SSXP9-201ENST00000417503 292 ntBASIC4.89□□□□□ -1.63
CCNFP41002 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.89□□□□□ -1.63
CCNFP41002 RPS12P23-201ENST00000419579 400 ntBASIC4.89□□□□□ -1.63
CCNFP41002 AC093162.1-201ENST00000419682 124 ntBASIC4.89□□□□□ -1.63
CCNFP41002 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.89□□□□□ -1.63
CCNFP41002 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.89□□□□□ -1.63
CCNFP41002 AC004866.2-201ENST00000438285 481 ntBASIC4.89□□□□□ -1.63
CCNFP41002 RPL23AP89-201ENST00000439324 255 ntBASIC4.89□□□□□ -1.63
CCNFP41002 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.89□□□□□ -1.63
CCNFP41002 Z80107.2-201ENST00000445127 392 ntBASIC4.89□□□□□ -1.63
CCNFP41002 GAPDHP27-201ENST00000447427 1020 ntBASIC4.89□□□□□ -1.63
CCNFP41002 AC000111.2-201ENST00000448200 210 ntBASIC4.89□□□□□ -1.63
CCNFP41002 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.89□□□□□ -1.63
CCNFP41002 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.89□□□□□ -1.63
CCNFP41002 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.89□□□□□ -1.63
CCNFP41002 TRBV1-201ENST00000476502 284 ntBASIC4.89□□□□□ -1.63
CCNFP41002 AC098591.2-201ENST00000510152 315 ntBASIC4.89□□□□□ -1.63
CCNFP41002 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCNFP41002 AC135001.1-201ENST00000544546 283 ntBASIC4.89□□□□□ -1.63
CCNFP41002 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.89□□□□□ -1.63
CCNFP41002 AC093012.1-202ENST00000549403 582 ntBASIC4.89□□□□□ -1.63
CCNFP41002 AC126177.3-201ENST00000551839 688 ntBASIC4.89□□□□□ -1.63
CCNFP41002 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.89□□□□□ -1.63
CCNFP41002 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.89□□□□□ -1.63
CCNFP41002 AC007151.1-201ENST00000572774 483 ntBASIC4.89□□□□□ -1.63
CCNFP41002 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.89□□□□□ -1.63
CCNFP41002 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.89□□□□□ -1.63
CCNFP41002 MIR6719-201ENST00000622428 87 ntBASIC4.89□□□□□ -1.63
CCNFP41002 AL445363.3-201ENST00000623080 671 ntBASIC4.89□□□□□ -1.63
CCNFP41002 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.89□□□□□ -1.63
CCNFP41002 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CCNFP41002 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CCNFP41002 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCNFP41002 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.89□□□□□ -1.63
CCNFP41002 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCNFP41002 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.89□□□□□ -1.63
CCNFP41002 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCNFP41002 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.89□□□□□ -1.63
CCNFP41002 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CCNFP41002 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.89□□□□□ -1.63
CCNFP41002 AC090337.1-201ENST00000579651 2074 ntBASIC4.88□□□□□ -1.63
CCNFP41002 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCNFP41002 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
CCNFP41002 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.88□□□□□ -1.63
CCNFP41002 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCNFP41002 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCNFP41002 AC007823.1-201ENST00000569932 1566 ntBASIC4.88□□□□□ -1.63
CCNFP41002 AL672167.1-203ENST00000641299 2975 ntBASIC4.88□□□□□ -1.63
CCNFP41002 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.88□□□□□ -1.63
CCNFP41002 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.88□□□□□ -1.63
CCNFP41002 SNORA23-201ENST00000365128 182 ntBASIC4.88□□□□□ -1.63
CCNFP41002 RNA5SP455-201ENST00000365190 119 ntBASIC4.88□□□□□ -1.63
CCNFP41002 SNORD96B-201ENST00000386148 79 ntBASIC4.88□□□□□ -1.63
CCNFP41002 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CCNFP41002 SNORD70.1-201ENST00000391007 85 ntBASIC4.88□□□□□ -1.63
CCNFP41002 MIR450B-201ENST00000401182 78 ntBASIC4.88□□□□□ -1.63
CCNFP41002 AL139039.1-201ENST00000401900 692 ntBASIC4.88□□□□□ -1.63
CCNFP41002 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.88□□□□□ -1.63
CCNFP41002 RPS23P10-201ENST00000416185 486 ntBASIC4.88□□□□□ -1.63
CCNFP41002 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.88□□□□□ -1.63
CCNFP41002 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.88□□□□□ -1.63
CCNFP41002 RPS26P2-201ENST00000440331 348 ntBASIC4.88□□□□□ -1.63
CCNFP41002 AC073587.1-201ENST00000447093 876 ntBASIC4.88□□□□□ -1.63
CCNFP41002 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.88□□□□□ -1.63
CCNFP41002 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.88□□□□□ -1.63
CCNFP41002 Y_RNA.653-201ENST00000459091 95 ntBASIC4.88□□□□□ -1.63
CCNFP41002 BX284632.1-201ENST00000478218 541 ntBASIC4.88□□□□□ -1.63
CCNFP41002 DEFB109F-201ENST00000491870 277 ntBASIC4.88□□□□□ -1.63
CCNFP41002 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.88□□□□□ -1.63
CCNFP41002 AC008953.1-201ENST00000497334 318 ntBASIC4.88□□□□□ -1.63
CCNFP41002 AC231760.1-201ENST00000498002 260 ntBASIC4.88□□□□□ -1.63
CCNFP41002 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCNFP41002 RNA5SP43-201ENST00000516559 110 ntBASIC4.88□□□□□ -1.63
CCNFP41002 RN7SKP147-201ENST00000517154 244 ntBASIC4.88□□□□□ -1.63
CCNFP41002 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.88□□□□□ -1.63
CCNFP41002 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.88□□□□□ -1.63
CCNFP41002 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.88□□□□□ -1.63
CCNFP41002 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.88□□□□□ -1.63
CCNFP41002 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.88□□□□□ -1.63
CCNFP41002 AL121576.1-201ENST00000556055 276 ntBASIC4.88□□□□□ -1.63
CCNFP41002 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.88□□□□□ -1.63
CCNFP41002 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms