Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RPL31P2-201ENST00000413849 377 ntBASIC4.33□□□□□ -1.72
COL15A1P39059 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.33□□□□□ -1.72
COL15A1P39059 AC063979.1-201ENST00000415539 377 ntBASIC4.33□□□□□ -1.72
COL15A1P39059 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.33□□□□□ -1.72
COL15A1P39059 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.33□□□□□ -1.72
COL15A1P39059 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.33□□□□□ -1.72
COL15A1P39059 RPL7P36-201ENST00000444633 681 ntBASIC4.33□□□□□ -1.72
COL15A1P39059 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.33□□□□□ -1.72
COL15A1P39059 AC133473.1-201ENST00000455173 299 ntBASIC4.33□□□□□ -1.72
COL15A1P39059 TPT1P7-201ENST00000458300 517 ntBASIC4.33□□□□□ -1.72
COL15A1P39059 snoU109.1-201ENST00000459339 135 ntBASIC4.33□□□□□ -1.72
COL15A1P39059 AC110794.1-201ENST00000505816 425 ntBASIC4.33□□□□□ -1.72
COL15A1P39059 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.33□□□□□ -1.72
COL15A1P39059 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.33□□□□□ -1.72
COL15A1P39059 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.33□□□□□ -1.72
COL15A1P39059 AC137800.2-201ENST00000574375 120 ntBASIC4.33□□□□□ -1.72
COL15A1P39059 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.33□□□□□ -1.72
COL15A1P39059 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.33□□□□□ -1.72
COL15A1P39059 OR4G1P-201ENST00000588632 938 ntBASIC4.33□□□□□ -1.72
COL15A1P39059 AP003117.2-201ENST00000606010 545 ntBASIC4.33□□□□□ -1.72
COL15A1P39059 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL15A1P39059 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL15A1P39059 CEP170P1-201ENST00000502249 4587 ntBASIC4.33□□□□□ -1.72
COL15A1P39059 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL15A1P39059 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
COL15A1P39059 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL15A1P39059 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL15A1P39059 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
COL15A1P39059 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL15A1P39059 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL15A1P39059 AL161781.1-201ENST00000354277 403 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 Y_RNA.3-201ENST00000362331 103 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 RNU6-744P-201ENST00000365557 107 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 RNU6-1316P-201ENST00000384242 108 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 RNU6-348P-201ENST00000384386 107 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 RNU6-769P-201ENST00000384407 104 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 AIMP1P1-201ENST00000418670 937 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 AL513174.1-201ENST00000423182 629 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 AC002075.2-201ENST00000425207 252 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.32□□□□□ -1.72
COL15A1P39059 PSMA6P3-201ENST00000428242 164 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.32□□□□□ -1.72
COL15A1P39059 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.32□□□□□ -1.72
COL15A1P39059 RPL22P17-201ENST00000438729 315 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.32□□□□□ -1.72
COL15A1P39059 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.32□□□□□ -1.72
COL15A1P39059 MTCO1P42-201ENST00000457379 726 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 SNORD42A-201ENST00000459584 64 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 SRRM1P2-201ENST00000464531 1192 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 UBE2DNL-203ENST00000474922 222 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 RPL21P103-201ENST00000479921 488 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 AC011825.1-201ENST00000484967 388 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 RPS3AP50-201ENST00000487064 803 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 HMGB1P36-201ENST00000487709 576 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 AC020893.1-201ENST00000502452 580 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 FTH1P9-201ENST00000513251 355 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 RNA5SP341-201ENST00000516261 117 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.32□□□□□ -1.72
COL15A1P39059 AC010546.1-201ENST00000569391 485 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 AL390208.1-201ENST00000605885 644 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 AC091965.4-201ENST00000607691 587 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.32□□□□□ -1.72
COL15A1P39059 AC087241.4-201ENST00000612441 480 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 AL589743.7-201ENST00000612637 233 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.32□□□□□ -1.72
COL15A1P39059 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.32□□□□□ -1.72
COL15A1P39059 AC233263.6-201ENST00000631132 1963 ntBASIC4.32□□□□□ -1.72
COL15A1P39059 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
COL15A1P39059 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
COL15A1P39059 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.31□□□□□ -1.72
COL15A1P39059 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL15A1P39059 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.31□□□□□ -1.72
COL15A1P39059 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
COL15A1P39059 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL15A1P39059 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.31□□□□□ -1.72
COL15A1P39059 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.31□□□□□ -1.72
COL15A1P39059 AL590233.1-201ENST00000430017 456 ntBASIC4.31□□□□□ -1.72
COL15A1P39059 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.31□□□□□ -1.72
COL15A1P39059 SDCBPP1-201ENST00000440192 890 ntBASIC4.31□□□□□ -1.72
COL15A1P39059 AP000542.1-201ENST00000448473 371 ntBASIC4.31□□□□□ -1.72
COL15A1P39059 Z82190.1-201ENST00000454534 490 ntBASIC4.31□□□□□ -1.72
COL15A1P39059 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.31□□□□□ -1.72
COL15A1P39059 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.31□□□□□ -1.72
COL15A1P39059 RPL27AP5-201ENST00000469428 449 ntBASIC4.31□□□□□ -1.72
COL15A1P39059 AC034222.1-201ENST00000494052 532 ntBASIC4.31□□□□□ -1.72
COL15A1P39059 AC112204.1-201ENST00000502591 103 ntBASIC4.31□□□□□ -1.72
COL15A1P39059 PTGES3P3-201ENST00000511479 482 ntBASIC4.31□□□□□ -1.72
COL15A1P39059 AL117351.2-201ENST00000513571 157 ntBASIC4.31□□□□□ -1.72
COL15A1P39059 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.31□□□□□ -1.72
COL15A1P39059 Vault.1-201ENST00000516474 102 ntBASIC4.31□□□□□ -1.72
COL15A1P39059 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.31□□□□□ -1.72
COL15A1P39059 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.31□□□□□ -1.72
COL15A1P39059 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.31□□□□□ -1.72
COL15A1P39059 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.31□□□□□ -1.72
COL15A1P39059 MIR4528-201ENST00000577763 90 ntBASIC4.31□□□□□ -1.72
COL15A1P39059 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.31□□□□□ -1.72
COL15A1P39059 AC006557.5-201ENST00000603126 811 ntBASIC4.31□□□□□ -1.72
COL15A1P39059 AC112191.3-201ENST00000604371 277 ntBASIC4.31□□□□□ -1.72
COL15A1P39059 AL021997.1-201ENST00000605757 193 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms