Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AL445493.3-201ENST00000619568 477 ntBASIC2.7□□□□□ -1.98
BRCA1P38398 CYP3A51P-201ENST00000633513 256 ntBASIC2.7□□□□□ -1.98
BRCA1P38398 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
BRCA1P38398 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
BRCA1P38398 AC244517.1-201ENST00000606030 2086 ntBASIC2.7□□□□□ -1.98
BRCA1P38398 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
BRCA1P38398 AC130650.2-201ENST00000618736 2403 ntBASIC2.7□□□□□ -1.98
BRCA1P38398 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.7□□□□□ -1.98
BRCA1P38398 AC002546.1-201ENST00000588041 2504 ntBASIC2.7□□□□□ -1.98
BRCA1P38398 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
BRCA1P38398 CYCSP49-201ENST00000420810 319 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.69□□□□□ -1.98
BRCA1P38398 AC009414.1-201ENST00000427200 443 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 SAR1AP4-201ENST00000429225 591 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.69□□□□□ -1.98
BRCA1P38398 AC005345.1-201ENST00000431868 217 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 SNRPEP4-201ENST00000435815 279 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 AC008628.1-201ENST00000508663 265 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.69□□□□□ -1.98
BRCA1P38398 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
BRCA1P38398 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.69□□□□□ -1.98
BRCA1P38398 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.69□□□□□ -1.98
BRCA1P38398 SNRPGP1-201ENST00000553864 222 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.69□□□□□ -1.98
BRCA1P38398 NIFKP8-201ENST00000560500 874 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 AC105137.2-201ENST00000569073 466 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 TPMTP1-201ENST00000592307 737 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.69□□□□□ -1.98
BRCA1P38398 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.69□□□□□ -1.98
BRCA1P38398 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.69□□□□□ -1.98
BRCA1P38398 AC097460.3-201ENST00000623099 442 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 AC084035.1-201ENST00000634543 607 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
BRCA1P38398 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
BRCA1P38398 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.69□□□□□ -1.98
BRCA1P38398 AP005901.5-201ENST00000545779 1796 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
BRCA1P38398 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
BRCA1P38398 DEFB109C-201ENST00000382575 264 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 DEFB109B-201ENST00000382656 264 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 RNU6-444P-201ENST00000383988 108 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 RNU6-441P-201ENST00000384545 106 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 MIR221-201ENST00000385135 110 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
BRCA1P38398 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.69□□□□□ -1.98
BRCA1P38398 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.69□□□□□ -1.98
BRCA1P38398 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.69□□□□□ -1.98
BRCA1P38398 AL691517.1-201ENST00000440833 1235 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 AL500527.1-201ENST00000448532 255 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 AL096803.2-201ENST00000450032 677 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.69□□□□□ -1.98
BRCA1P38398 MTCO3P44-201ENST00000510977 541 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 SNORA76.2-201ENST00000517095 137 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
BRCA1P38398 OR4K7P-201ENST00000580232 945 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 SNORD84-203ENST00000584275 78 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 MIR4506-201ENST00000584693 77 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.69□□□□□ -1.98
BRCA1P38398 AC055876.5-201ENST00000605667 259 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 AC099778.2-201ENST00000610904 211 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 VN1R74P-201ENST00000613259 503 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.69□□□□□ -1.98
BRCA1P38398 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.69□□□□□ -1.98
BRCA1P38398 AL590396.4-201ENST00000636779 956 ntBASIC2.69□□□□□ -1.98
BRCA1P38398 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
BRCA1P38398 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
BRCA1P38398 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
BRCA1P38398 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
BRCA1P38398 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.68□□□□□ -1.98
BRCA1P38398 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.68□□□□□ -1.98
BRCA1P38398 AL158050.1-201ENST00000416077 457 ntBASIC2.68□□□□□ -1.98
BRCA1P38398 RPL7P30-201ENST00000420888 709 ntBASIC2.68□□□□□ -1.98
BRCA1P38398 RPS15AP28-201ENST00000435088 386 ntBASIC2.68□□□□□ -1.98
BRCA1P38398 RPL36AP6-201ENST00000435770 321 ntBASIC2.68□□□□□ -1.98
BRCA1P38398 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.68□□□□□ -1.98
BRCA1P38398 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.68□□□□□ -1.98
BRCA1P38398 AC104073.1-201ENST00000451988 151 ntBASIC2.68□□□□□ -1.98
BRCA1P38398 GSTA11P-201ENST00000452866 669 ntBASIC2.68□□□□□ -1.98
BRCA1P38398 AC008379.1-201ENST00000463655 464 ntBASIC2.68□□□□□ -1.98
BRCA1P38398 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.68□□□□□ -1.98
BRCA1P38398 BOLA3P3-201ENST00000505182 232 ntBASIC2.68□□□□□ -1.98
BRCA1P38398 AP001207.1-201ENST00000524051 481 ntBASIC2.68□□□□□ -1.98
BRCA1P38398 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
BRCA1P38398 AC002076.2-201ENST00000617362 122 ntBASIC2.68□□□□□ -1.98
BRCA1P38398 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.68□□□□□ -1.98
BRCA1P38398 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
BRCA1P38398 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.68□□□□□ -1.98
BRCA1P38398 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
BRCA1P38398 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.67□□□□□ -1.98
BRCA1P38398 Y_RNA.466-201ENST00000384294 113 ntBASIC2.67□□□□□ -1.98
BRCA1P38398 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
BRCA1P38398 PTGES3P2-201ENST00000407942 482 ntBASIC2.67□□□□□ -1.98
BRCA1P38398 SNORA11.4-201ENST00000408823 129 ntBASIC2.67□□□□□ -1.98
BRCA1P38398 MTND4P15-201ENST00000437913 1033 ntBASIC2.67□□□□□ -1.98
BRCA1P38398 RPL17P49-201ENST00000443728 411 ntBASIC2.67□□□□□ -1.98
BRCA1P38398 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.67□□□□□ -1.98
BRCA1P38398 AC091179.1-201ENST00000461606 579 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms