Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CHKAP35790 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CHKAP35790 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CHKAP35790 TXNP7-201ENST00000406296 293 ntBASIC4.02□□□□□ -1.77
CHKAP35790 RN7SKP156-201ENST00000410308 342 ntBASIC4.02□□□□□ -1.77
CHKAP35790 AC006366.1-201ENST00000422002 759 ntBASIC4.02□□□□□ -1.77
CHKAP35790 AC008850.1-201ENST00000427546 362 ntBASIC4.02□□□□□ -1.77
CHKAP35790 RPL17P49-201ENST00000443728 411 ntBASIC4.02□□□□□ -1.77
CHKAP35790 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.02□□□□□ -1.77
CHKAP35790 AL122001.1-201ENST00000457027 370 ntBASIC4.02□□□□□ -1.77
CHKAP35790 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.02□□□□□ -1.77
CHKAP35790 snoU109.1-201ENST00000459339 135 ntBASIC4.02□□□□□ -1.77
CHKAP35790 RPS23P3-201ENST00000470993 430 ntBASIC4.02□□□□□ -1.77
CHKAP35790 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.02□□□□□ -1.77
CHKAP35790 AC020893.1-201ENST00000502452 580 ntBASIC4.02□□□□□ -1.77
CHKAP35790 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.02□□□□□ -1.77
CHKAP35790 GMPSP1-201ENST00000514075 579 ntBASIC4.02□□□□□ -1.77
CHKAP35790 RNU6-840P-201ENST00000517275 65 ntBASIC4.02□□□□□ -1.77
CHKAP35790 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CHKAP35790 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.02□□□□□ -1.77
CHKAP35790 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.02□□□□□ -1.77
CHKAP35790 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.02□□□□□ -1.77
CHKAP35790 RPL21P5-201ENST00000554662 472 ntBASIC4.02□□□□□ -1.77
CHKAP35790 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.02□□□□□ -1.77
CHKAP35790 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.02□□□□□ -1.77
CHKAP35790 AC090877.1-201ENST00000561418 344 ntBASIC4.02□□□□□ -1.77
CHKAP35790 AL157394.1-201ENST00000562983 1224 ntBASIC4.02□□□□□ -1.77
CHKAP35790 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.02□□□□□ -1.77
CHKAP35790 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.02□□□□□ -1.77
CHKAP35790 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.02□□□□□ -1.77
CHKAP35790 AC073544.2-201ENST00000601155 540 ntBASIC4.02□□□□□ -1.77
CHKAP35790 AC087752.4-201ENST00000605911 462 ntBASIC4.02□□□□□ -1.77
CHKAP35790 AC080013.6-201ENST00000606185 215 ntBASIC4.02□□□□□ -1.77
CHKAP35790 uc_338.12-201ENST00000616344 181 ntBASIC4.02□□□□□ -1.77
CHKAP35790 AP003399.1-201ENST00000637534 361 ntBASIC4.02□□□□□ -1.77
CHKAP35790 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.02□□□□□ -1.77
CHKAP35790 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CHKAP35790 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.01□□□□□ -1.77
CHKAP35790 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CHKAP35790 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHKAP35790 RNA5SP295-201ENST00000362655 121 ntBASIC4.01□□□□□ -1.77
CHKAP35790 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHKAP35790 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.01□□□□□ -1.77
CHKAP35790 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.01□□□□□ -1.77
CHKAP35790 AL159169.1-201ENST00000421119 127 ntBASIC4.01□□□□□ -1.77
CHKAP35790 AC018630.2-202ENST00000422992 927 ntBASIC4.01□□□□□ -1.77
CHKAP35790 NDUFB4P7-201ENST00000423198 363 ntBASIC4.01□□□□□ -1.77
CHKAP35790 RPL7L1P10-201ENST00000427790 463 ntBASIC4.01□□□□□ -1.77
CHKAP35790 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.01□□□□□ -1.77
CHKAP35790 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.01□□□□□ -1.77
CHKAP35790 AC005094.1-201ENST00000440420 368 ntBASIC4.01□□□□□ -1.77
CHKAP35790 RANP8-201ENST00000444720 713 ntBASIC4.01□□□□□ -1.77
CHKAP35790 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.01□□□□□ -1.77
CHKAP35790 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.01□□□□□ -1.77
CHKAP35790 SSXP1-201ENST00000453640 473 ntBASIC4.01□□□□□ -1.77
CHKAP35790 MTND1P12-201ENST00000455231 147 ntBASIC4.01□□□□□ -1.77
CHKAP35790 CFTRP1-201ENST00000456646 183 ntBASIC4.01□□□□□ -1.77
CHKAP35790 SNORD42A-201ENST00000459584 64 ntBASIC4.01□□□□□ -1.77
CHKAP35790 AC008481.1-201ENST00000463278 396 ntBASIC4.01□□□□□ -1.77
CHKAP35790 TRBV12-2-201ENST00000489763 344 ntBASIC4.01□□□□□ -1.77
CHKAP35790 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CHKAP35790 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.01□□□□□ -1.77
CHKAP35790 AP000873.5-201ENST00000533906 236 ntBASIC4.01□□□□□ -1.77
CHKAP35790 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.01□□□□□ -1.77
CHKAP35790 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.01□□□□□ -1.77
CHKAP35790 AC099489.2-201ENST00000574976 260 ntBASIC4.01□□□□□ -1.77
CHKAP35790 ZNF415P1-201ENST00000582279 1166 ntBASIC4.01□□□□□ -1.77
CHKAP35790 MIR3158-1-201ENST00000583596 81 ntBASIC4.01□□□□□ -1.77
CHKAP35790 AF038458.1-201ENST00000588406 262 ntBASIC4.01□□□□□ -1.77
CHKAP35790 AC244505.7-201ENST00000599675 272 ntBASIC4.01□□□□□ -1.77
CHKAP35790 AC008277.2-201ENST00000605196 797 ntBASIC4.01□□□□□ -1.77
CHKAP35790 AC108747.1-201ENST00000609508 535 ntBASIC4.01□□□□□ -1.77
CHKAP35790 AP000254.1-201ENST00000609934 520 ntBASIC4.01□□□□□ -1.77
CHKAP35790 AC048344.4-201ENST00000619744 527 ntBASIC4.01□□□□□ -1.77
CHKAP35790 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.01□□□□□ -1.77
CHKAP35790 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHKAP35790 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.01□□□□□ -1.77
CHKAP35790 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CHKAP35790 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CHKAP35790 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4□□□□□ -1.77
CHKAP35790 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4□□□□□ -1.77
CHKAP35790 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
CHKAP35790 U1.1-201ENST00000384101 164 ntBASIC4□□□□□ -1.77
CHKAP35790 MIR199A2-201ENST00000385289 110 ntBASIC4□□□□□ -1.77
CHKAP35790 AL591034.1-201ENST00000407447 340 ntBASIC4□□□□□ -1.77
CHKAP35790 Z98941.1-201ENST00000407764 100 ntBASIC4□□□□□ -1.77
CHKAP35790 RPL21P24-201ENST00000413752 448 ntBASIC4□□□□□ -1.77
CHKAP35790 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4□□□□□ -1.77
CHKAP35790 RPL21P109-201ENST00000422213 475 ntBASIC4□□□□□ -1.77
CHKAP35790 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4□□□□□ -1.77
CHKAP35790 AL445584.1-201ENST00000431451 330 ntBASIC4□□□□□ -1.77
CHKAP35790 USP12PX-201ENST00000432383 1057 ntBASIC4□□□□□ -1.77
CHKAP35790 AC093156.1-201ENST00000440382 670 ntBASIC4□□□□□ -1.77
CHKAP35790 PGBD4P3-201ENST00000440731 581 ntBASIC4□□□□□ -1.77
CHKAP35790 NOTCH2P1-201ENST00000443481 624 ntBASIC4□□□□□ -1.77
CHKAP35790 AL033528.1-201ENST00000453780 140 ntBASIC4□□□□□ -1.77
CHKAP35790 AL049714.1-201ENST00000466686 347 ntBASIC4□□□□□ -1.77
CHKAP35790 ACTR3P3-201ENST00000480448 893 ntBASIC4□□□□□ -1.77
CHKAP35790 AC068724.1-201ENST00000487100 792 ntBASIC4□□□□□ -1.77
CHKAP35790 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms