Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.76□□□□□ -1.97
RORAP35398 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.76□□□□□ -1.97
RORAP35398 RNA5SP356-201ENST00000515972 94 ntBASIC2.76□□□□□ -1.97
RORAP35398 RNU6-826P-201ENST00000516827 104 ntBASIC2.76□□□□□ -1.97
RORAP35398 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.76□□□□□ -1.97
RORAP35398 AC087808.1-201ENST00000520501 361 ntBASIC2.76□□□□□ -1.97
RORAP35398 OR5AK1P-201ENST00000524837 922 ntBASIC2.76□□□□□ -1.97
RORAP35398 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.76□□□□□ -1.97
RORAP35398 HSPE1P20-201ENST00000538133 289 ntBASIC2.76□□□□□ -1.97
RORAP35398 OR7K1P-201ENST00000546439 926 ntBASIC2.76□□□□□ -1.97
RORAP35398 AC128657.1-201ENST00000549459 145 ntBASIC2.76□□□□□ -1.97
RORAP35398 AC090695.1-201ENST00000561269 1222 ntBASIC2.76□□□□□ -1.97
RORAP35398 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RORAP35398 MIR4672-201ENST00000583126 81 ntBASIC2.76□□□□□ -1.97
RORAP35398 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.76□□□□□ -1.97
RORAP35398 DNAJC19P3-201ENST00000594491 331 ntBASIC2.76□□□□□ -1.97
RORAP35398 AC015871.2-201ENST00000603605 948 ntBASIC2.76□□□□□ -1.97
RORAP35398 AC112220.2-201ENST00000605513 533 ntBASIC2.76□□□□□ -1.97
RORAP35398 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.76□□□□□ -1.97
RORAP35398 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.76□□□□□ -1.97
RORAP35398 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RORAP35398 AC010872.1-201ENST00000624225 675 ntBASIC2.76□□□□□ -1.97
RORAP35398 AC120349.2-201ENST00000625002 298 ntBASIC2.76□□□□□ -1.97
RORAP35398 AL138960.2-201ENST00000625145 535 ntBASIC2.76□□□□□ -1.97
RORAP35398 Z82195.2-201ENST00000612348 18351 ntBASIC2.76□□□□□ -1.97
RORAP35398 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
RORAP35398 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
RORAP35398 AC109315.1-201ENST00000584143 1347 ntBASIC2.75□□□□□ -1.97
RORAP35398 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
RORAP35398 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RORAP35398 AL672167.1-206ENST00000356293 943 ntBASIC2.75□□□□□ -1.97
RORAP35398 RNU6-216P-201ENST00000363282 104 ntBASIC2.75□□□□□ -1.97
RORAP35398 RNU6-1155P-201ENST00000363554 107 ntBASIC2.75□□□□□ -1.97
RORAP35398 SNORA18.3-201ENST00000384122 132 ntBASIC2.75□□□□□ -1.97
RORAP35398 RNU2-42P-201ENST00000410697 113 ntBASIC2.75□□□□□ -1.97
RORAP35398 AL449283.1-202ENST00000418249 604 ntBASIC2.75□□□□□ -1.97
RORAP35398 RPL27AP8-201ENST00000424277 446 ntBASIC2.75□□□□□ -1.97
RORAP35398 AC105272.1-201ENST00000438604 198 ntBASIC2.75□□□□□ -1.97
RORAP35398 RPS24P13-201ENST00000442520 397 ntBASIC2.75□□□□□ -1.97
RORAP35398 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.75□□□□□ -1.97
RORAP35398 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.75□□□□□ -1.97
RORAP35398 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.75□□□□□ -1.97
RORAP35398 TRGVB-201ENST00000453257 471 ntBASIC2.75□□□□□ -1.97
RORAP35398 AL359385.1-201ENST00000456509 365 ntBASIC2.75□□□□□ -1.97
RORAP35398 AC008571.1-201ENST00000467232 300 ntBASIC2.75□□□□□ -1.97
RORAP35398 RPS15AP17-201ENST00000470598 390 ntBASIC2.75□□□□□ -1.97
RORAP35398 RPS27AP9-201ENST00000477681 438 ntBASIC2.75□□□□□ -1.97
RORAP35398 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RORAP35398 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.75□□□□□ -1.97
RORAP35398 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.75□□□□□ -1.97
RORAP35398 RN7SKP132-201ENST00000516001 208 ntBASIC2.75□□□□□ -1.97
RORAP35398 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.75□□□□□ -1.97
RORAP35398 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.75□□□□□ -1.97
RORAP35398 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.75□□□□□ -1.97
RORAP35398 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.75□□□□□ -1.97
RORAP35398 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.75□□□□□ -1.97
RORAP35398 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.75□□□□□ -1.97
RORAP35398 CYCSP39-201ENST00000565821 309 ntBASIC2.75□□□□□ -1.97
RORAP35398 MIR3912-201ENST00000577566 105 ntBASIC2.75□□□□□ -1.97
RORAP35398 AC024153.1-201ENST00000603103 365 ntBASIC2.75□□□□□ -1.97
RORAP35398 AC006023.1-201ENST00000603944 259 ntBASIC2.75□□□□□ -1.97
RORAP35398 HSPE1P7-201ENST00000604681 321 ntBASIC2.75□□□□□ -1.97
RORAP35398 AC069545.1-201ENST00000605671 358 ntBASIC2.75□□□□□ -1.97
RORAP35398 RPL23AP88-201ENST00000605759 454 ntBASIC2.75□□□□□ -1.97
RORAP35398 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.75□□□□□ -1.97
RORAP35398 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.75□□□□□ -1.97
RORAP35398 AC123767.1-202ENST00000620407 817 ntBASIC2.75□□□□□ -1.97
RORAP35398 AL356585.4-201ENST00000623078 1229 ntBASIC2.75□□□□□ -1.97
RORAP35398 AC026241.1-201ENST00000517873 2142 ntBASIC2.75□□□□□ -1.97
RORAP35398 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RORAP35398 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
RORAP35398 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RORAP35398 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
RORAP35398 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RORAP35398 RNU6-224P-201ENST00000384055 107 ntBASIC2.74□□□□□ -1.97
RORAP35398 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RORAP35398 SNRPEP2-201ENST00000397592 279 ntBASIC2.74□□□□□ -1.97
RORAP35398 AC068533.2-201ENST00000411872 306 ntBASIC2.74□□□□□ -1.97
RORAP35398 BX682237.1-201ENST00000415016 335 ntBASIC2.74□□□□□ -1.97
RORAP35398 AC007435.1-201ENST00000421086 415 ntBASIC2.74□□□□□ -1.97
RORAP35398 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.74□□□□□ -1.97
RORAP35398 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.74□□□□□ -1.97
RORAP35398 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.74□□□□□ -1.97
RORAP35398 RPL23AP74-201ENST00000437246 471 ntBASIC2.74□□□□□ -1.97
RORAP35398 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.74□□□□□ -1.97
RORAP35398 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.74□□□□□ -1.97
RORAP35398 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.74□□□□□ -1.97
RORAP35398 MTCYBP11-201ENST00000447254 1109 ntBASIC2.74□□□□□ -1.97
RORAP35398 RPL39P6-201ENST00000448289 150 ntBASIC2.74□□□□□ -1.97
RORAP35398 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.74□□□□□ -1.97
RORAP35398 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.74□□□□□ -1.97
RORAP35398 SEM1P1-201ENST00000506694 209 ntBASIC2.74□□□□□ -1.97
RORAP35398 AC006445.2-201ENST00000510061 472 ntBASIC2.74□□□□□ -1.97
RORAP35398 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RORAP35398 MIR4513-201ENST00000581077 86 ntBASIC2.74□□□□□ -1.97
RORAP35398 MIR3609-201ENST00000582661 80 ntBASIC2.74□□□□□ -1.97
RORAP35398 VN1R83P-201ENST00000595685 445 ntBASIC2.74□□□□□ -1.97
RORAP35398 AL390838.2-201ENST00000602394 274 ntBASIC2.74□□□□□ -1.97
RORAP35398 RPL12P50-201ENST00000603116 116 ntBASIC2.74□□□□□ -1.97
RORAP35398 AC005332.6-201ENST00000613178 446 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms