Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 AC007115.1-201ENST00000546853 234 ntBASIC2.3□□□□□ -2.04
CD40LGP29965 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
CD40LGP29965 RPS15AP11-201ENST00000594193 385 ntBASIC2.3□□□□□ -2.04
CD40LGP29965 AL031176.1-201ENST00000604554 466 ntBASIC2.3□□□□□ -2.04
CD40LGP29965 AC103710.4-201ENST00000609301 899 ntBASIC2.3□□□□□ -2.04
CD40LGP29965 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.3□□□□□ -2.04
CD40LGP29965 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.3□□□□□ -2.04
CD40LGP29965 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
CD40LGP29965 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CD40LGP29965 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CD40LGP29965 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.29□□□□□ -2.04
CD40LGP29965 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CD40LGP29965 RPL21P132-201ENST00000331267 462 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 AC016769.3-201ENST00000396562 315 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 TMSB4XP8-201ENST00000402089 135 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 AL162578.1-201ENST00000406202 378 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 RNU2-47P-201ENST00000410649 186 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 EEF1A1P41-201ENST00000414667 207 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 TMSB4XP6-201ENST00000415187 135 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 Z85995.1-201ENST00000415547 335 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 Z75741.2-201ENST00000417272 1167 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.29□□□□□ -2.04
CD40LGP29965 NDUFB4P7-201ENST00000423198 363 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 TMSB4XP1-201ENST00000424567 135 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 AL590383.1-201ENST00000428602 75 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 AL356867.1-201ENST00000429623 299 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 IFNA11P-201ENST00000446352 526 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 AL050341.1-201ENST00000447743 313 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 AL139109.1-201ENST00000455491 297 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 RPL32P14-201ENST00000463196 378 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.29□□□□□ -2.04
CD40LGP29965 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.29□□□□□ -2.04
CD40LGP29965 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.29□□□□□ -2.04
CD40LGP29965 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.29□□□□□ -2.04
CD40LGP29965 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.29□□□□□ -2.04
CD40LGP29965 AC009127.3-201ENST00000570531 403 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 AC135507.1-201ENST00000607214 561 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 AL592148.2-201ENST00000612210 372 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 AC093838.1-201ENST00000613014 469 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 AL162233.1-201ENST00000620014 944 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 MIR7515-201ENST00000637837 67 ntBASIC2.29□□□□□ -2.04
CD40LGP29965 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CD40LGP29965 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.28□□□□□ -2.04
CD40LGP29965 MIR208A-201ENST00000362287 71 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.28□□□□□ -2.04
CD40LGP29965 RNU6-878P-201ENST00000384578 110 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 SNORD116-23-201ENST00000384645 92 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.28□□□□□ -2.04
CD40LGP29965 FCF1P2-201ENST00000415284 583 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 SEPT2P1-201ENST00000419651 180 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.28□□□□□ -2.04
CD40LGP29965 AL512844.2-201ENST00000433990 593 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.28□□□□□ -2.04
CD40LGP29965 RPL26P6-201ENST00000440913 438 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.28□□□□□ -2.04
CD40LGP29965 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 AL031659.1-201ENST00000447075 539 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.28□□□□□ -2.04
CD40LGP29965 AC008427.1-201ENST00000503102 655 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.28□□□□□ -2.04
CD40LGP29965 AC048346.1-201ENST00000510247 144 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CD40LGP29965 AC109471.1-201ENST00000511631 612 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.28□□□□□ -2.04
CD40LGP29965 AP003467.2-201ENST00000520175 319 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 CKS1BP7-201ENST00000522230 235 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.28□□□□□ -2.04
CD40LGP29965 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.28□□□□□ -2.04
CD40LGP29965 AC067805.1-201ENST00000559344 470 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 AC104229.1-201ENST00000561364 255 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 AL355877.2-201ENST00000603670 358 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 AP001002.2-201ENST00000625137 386 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 AC132825.7-201ENST00000638744 335 ntBASIC2.28□□□□□ -2.04
CD40LGP29965 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.05
CD40LGP29965 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CD40LGP29965 AL049641.1-201ENST00000441055 1948 ntBASIC2.27□□□□□ -2.05
CD40LGP29965 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CD40LGP29965 DBF4P1-201ENST00000412976 1892 ntBASIC2.27□□□□□ -2.05
CD40LGP29965 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.27□□□□□ -2.05
CD40LGP29965 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.27□□□□□ -2.05
CD40LGP29965 RNU4-72P-201ENST00000410754 173 ntBASIC2.27□□□□□ -2.05
CD40LGP29965 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.27□□□□□ -2.05
CD40LGP29965 MTND1P23-201ENST00000416931 372 ntBASIC2.27□□□□□ -2.05
CD40LGP29965 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.27□□□□□ -2.05
CD40LGP29965 WARS2P1-201ENST00000429678 537 ntBASIC2.27□□□□□ -2.05
CD40LGP29965 AC241584.1-201ENST00000438469 1241 ntBASIC2.27□□□□□ -2.05
CD40LGP29965 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
CD40LGP29965 IGLV3-17-201ENST00000519099 244 ntBASIC2.27□□□□□ -2.05
CD40LGP29965 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.27□□□□□ -2.05
CD40LGP29965 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.27□□□□□ -2.05
CD40LGP29965 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.27□□□□□ -2.05
CD40LGP29965 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.27□□□□□ -2.05
CD40LGP29965 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.27□□□□□ -2.05
CD40LGP29965 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.27□□□□□ -2.05
CD40LGP29965 AC078814.3-201ENST00000553036 491 ntBASIC2.27□□□□□ -2.05
CD40LGP29965 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.27□□□□□ -2.05
CD40LGP29965 NIFKP8-201ENST00000560500 874 ntBASIC2.27□□□□□ -2.05
CD40LGP29965 ISCA1P3-201ENST00000577104 373 ntBASIC2.27□□□□□ -2.05
CD40LGP29965 AC013553.2-201ENST00000604244 589 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms