Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHC1P29353 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
SHC1P29353 SNORA31-201ENST00000362607 130 ntBASIC3.09□□□□□ -1.91
SHC1P29353 RNA5SP189-201ENST00000364920 115 ntBASIC3.09□□□□□ -1.91
SHC1P29353 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.09□□□□□ -1.91
SHC1P29353 RNU6-297P-201ENST00000384636 107 ntBASIC3.09□□□□□ -1.91
SHC1P29353 MIR649-201ENST00000384843 97 ntBASIC3.09□□□□□ -1.91
SHC1P29353 MIR183-201ENST00000384958 110 ntBASIC3.09□□□□□ -1.91
SHC1P29353 MIR1250-201ENST00000408098 113 ntBASIC3.09□□□□□ -1.91
SHC1P29353 AC109780.2-201ENST00000413467 845 ntBASIC3.09□□□□□ -1.91
SHC1P29353 RPL31P2-201ENST00000413849 377 ntBASIC3.09□□□□□ -1.91
SHC1P29353 AC083875.1-201ENST00000419509 405 ntBASIC3.09□□□□□ -1.91
SHC1P29353 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.09□□□□□ -1.91
SHC1P29353 AL513174.1-201ENST00000423182 629 ntBASIC3.09□□□□□ -1.91
SHC1P29353 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.09□□□□□ -1.91
SHC1P29353 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.09□□□□□ -1.91
SHC1P29353 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.09□□□□□ -1.91
SHC1P29353 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.09□□□□□ -1.91
SHC1P29353 AL159987.2-201ENST00000432754 307 ntBASIC3.09□□□□□ -1.91
SHC1P29353 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.09□□□□□ -1.91
SHC1P29353 AL831737.1-201ENST00000441288 271 ntBASIC3.09□□□□□ -1.91
SHC1P29353 AL358232.1-201ENST00000448030 501 ntBASIC3.09□□□□□ -1.91
SHC1P29353 MTCO1P27-201ENST00000448269 226 ntBASIC3.09□□□□□ -1.91
SHC1P29353 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.09□□□□□ -1.91
SHC1P29353 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.09□□□□□ -1.91
SHC1P29353 MTCO3P2-201ENST00000457365 171 ntBASIC3.09□□□□□ -1.91
SHC1P29353 HMGN1P18-201ENST00000457642 277 ntBASIC3.09□□□□□ -1.91
SHC1P29353 MEMO1P3-201ENST00000459811 302 ntBASIC3.09□□□□□ -1.91
SHC1P29353 RPL23AP62-201ENST00000463396 453 ntBASIC3.09□□□□□ -1.91
SHC1P29353 RPS4XP10-201ENST00000465034 731 ntBASIC3.09□□□□□ -1.91
SHC1P29353 AP000797.1-201ENST00000478870 387 ntBASIC3.09□□□□□ -1.91
SHC1P29353 AC092451.1-201ENST00000480211 153 ntBASIC3.09□□□□□ -1.91
SHC1P29353 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.09□□□□□ -1.91
SHC1P29353 TMEM251P1-201ENST00000503717 318 ntBASIC3.09□□□□□ -1.91
SHC1P29353 AC026412.2-201ENST00000512270 1075 ntBASIC3.09□□□□□ -1.91
SHC1P29353 RNU2-58P-201ENST00000516403 183 ntBASIC3.09□□□□□ -1.91
SHC1P29353 AC025881.1-201ENST00000518851 512 ntBASIC3.09□□□□□ -1.91
SHC1P29353 AC093331.1-201ENST00000521474 169 ntBASIC3.09□□□□□ -1.91
SHC1P29353 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.09□□□□□ -1.91
SHC1P29353 OR4R3P-201ENST00000525084 838 ntBASIC3.09□□□□□ -1.91
SHC1P29353 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.09□□□□□ -1.91
SHC1P29353 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.09□□□□□ -1.91
SHC1P29353 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.09□□□□□ -1.91
SHC1P29353 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.09□□□□□ -1.91
SHC1P29353 AC090616.5-202ENST00000582111 297 ntBASIC3.09□□□□□ -1.91
SHC1P29353 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.09□□□□□ -1.91
SHC1P29353 AC005771.1-201ENST00000585581 349 ntBASIC3.09□□□□□ -1.91
SHC1P29353 AC083760.1-201ENST00000589621 670 ntBASIC3.09□□□□□ -1.91
SHC1P29353 AC007566.2-201ENST00000603642 413 ntBASIC3.09□□□□□ -1.91
SHC1P29353 AC098614.4-201ENST00000607601 462 ntBASIC3.09□□□□□ -1.91
SHC1P29353 AC097468.3-201ENST00000607956 456 ntBASIC3.09□□□□□ -1.91
SHC1P29353 AC007496.3-201ENST00000624987 3443 ntBASIC3.09□□□□□ -1.91
SHC1P29353 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHC1P29353 AC004972.1-201ENST00000623934 2209 ntBASIC3.09□□□□□ -1.91
SHC1P29353 ELL2P4-201ENST00000446870 1376 ntBASIC3.09□□□□□ -1.92
SHC1P29353 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.09□□□□□ -1.92
SHC1P29353 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.09□□□□□ -1.92
SHC1P29353 MTCO1P12-201ENST00000414273 1543 ntBASIC3.09□□□□□ -1.92
SHC1P29353 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.09□□□□□ -1.92
SHC1P29353 AC032011.1-201ENST00000611703 1549 ntBASIC3.09□□□□□ -1.92
SHC1P29353 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.09□□□□□ -1.92
SHC1P29353 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SHC1P29353 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SHC1P29353 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SHC1P29353 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHC1P29353 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHC1P29353 USP8P1-201ENST00000494673 3183 ntBASIC3.08□□□□□ -1.92
SHC1P29353 RNU5F-7P-201ENST00000363696 115 ntBASIC3.08□□□□□ -1.92
SHC1P29353 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHC1P29353 EIF5P1-201ENST00000400019 1231 ntBASIC3.08□□□□□ -1.92
SHC1P29353 DHFRP6-201ENST00000401776 268 ntBASIC3.08□□□□□ -1.92
SHC1P29353 FCF1P9-201ENST00000412546 282 ntBASIC3.08□□□□□ -1.92
SHC1P29353 Z99755.1-201ENST00000414048 380 ntBASIC3.08□□□□□ -1.92
SHC1P29353 EI24P1-201ENST00000416584 867 ntBASIC3.08□□□□□ -1.92
SHC1P29353 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.08□□□□□ -1.92
SHC1P29353 AC005517.2-201ENST00000424673 553 ntBASIC3.08□□□□□ -1.92
SHC1P29353 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.08□□□□□ -1.92
SHC1P29353 AL022238.1-201ENST00000442557 355 ntBASIC3.08□□□□□ -1.92
SHC1P29353 GDI2P2-201ENST00000445131 608 ntBASIC3.08□□□□□ -1.92
SHC1P29353 AC125238.1-201ENST00000448842 249 ntBASIC3.08□□□□□ -1.92
SHC1P29353 RNU7-136P-201ENST00000458819 69 ntBASIC3.08□□□□□ -1.92
SHC1P29353 PLGLA-201ENST00000465668 449 ntBASIC3.08□□□□□ -1.92
SHC1P29353 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SHC1P29353 AC087879.1-201ENST00000474343 374 ntBASIC3.08□□□□□ -1.92
SHC1P29353 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.08□□□□□ -1.92
SHC1P29353 AF131216.2-201ENST00000512316 564 ntBASIC3.08□□□□□ -1.92
SHC1P29353 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.08□□□□□ -1.92
SHC1P29353 AC116347.2-201ENST00000514912 523 ntBASIC3.08□□□□□ -1.92
SHC1P29353 MTND5P4-201ENST00000514978 288 ntBASIC3.08□□□□□ -1.92
SHC1P29353 FABP5P5-201ENST00000515537 406 ntBASIC3.08□□□□□ -1.92
SHC1P29353 SNORA64.4-201ENST00000516632 81 ntBASIC3.08□□□□□ -1.92
SHC1P29353 AC104986.1-201ENST00000517978 436 ntBASIC3.08□□□□□ -1.92
SHC1P29353 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.08□□□□□ -1.92
SHC1P29353 AC104027.1-201ENST00000521887 300 ntBASIC3.08□□□□□ -1.92
SHC1P29353 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SHC1P29353 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.08□□□□□ -1.92
SHC1P29353 AC016957.1-201ENST00000534895 309 ntBASIC3.08□□□□□ -1.92
SHC1P29353 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.08□□□□□ -1.92
SHC1P29353 AC005476.1-201ENST00000554427 397 ntBASIC3.08□□□□□ -1.92
SHC1P29353 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms