Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AL157394.1-201ENST00000562983 1224 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 AC006116.10-201ENST00000591836 581 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.28□□□□□ -1.72
POLR2AP24928 AL355802.3-201ENST00000607571 545 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 RMST_3.1-201ENST00000611651 109 ntBASIC4.28□□□□□ -1.72
POLR2AP24928 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.28□□□□□ -1.72
POLR2AP24928 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.28□□□□□ -1.72
POLR2AP24928 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.28□□□□□ -1.72
POLR2AP24928 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
POLR2AP24928 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
POLR2AP24928 OR5J1P-201ENST00000313544 939 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 RNA5SP197-201ENST00000363357 119 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 Y_RNA.548-201ENST00000384656 105 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 MIR1284-201ENST00000408337 120 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.27□□□□□ -1.73
POLR2AP24928 USP9YP36-201ENST00000424581 829 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 AL445669.1-201ENST00000426743 755 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 AC133104.1-201ENST00000429100 218 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.27□□□□□ -1.73
POLR2AP24928 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.27□□□□□ -1.73
POLR2AP24928 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.27□□□□□ -1.73
POLR2AP24928 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.27□□□□□ -1.73
POLR2AP24928 AL591623.2-201ENST00000449978 222 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 RPL26P28-201ENST00000451325 435 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 SNORD105B-201ENST00000458770 79 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.27□□□□□ -1.73
POLR2AP24928 AC006445.1-201ENST00000491925 405 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.27□□□□□ -1.73
POLR2AP24928 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.27□□□□□ -1.73
POLR2AP24928 RNU2-27P-201ENST00000516185 142 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 Y_RNA.682-201ENST00000516457 100 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.27□□□□□ -1.73
POLR2AP24928 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.27□□□□□ -1.73
POLR2AP24928 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.27□□□□□ -1.73
POLR2AP24928 MIR4307-201ENST00000582802 84 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 AC006272.2-201ENST00000594725 163 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 AL451049.1-201ENST00000608672 497 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.27□□□□□ -1.73
POLR2AP24928 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
POLR2AP24928 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
POLR2AP24928 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.27□□□□□ -1.73
POLR2AP24928 Y_RNA.160-201ENST00000363677 92 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 Y_RNA.460-201ENST00000384255 102 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
POLR2AP24928 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.27□□□□□ -1.73
POLR2AP24928 GSTM3P2-201ENST00000412746 530 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 AMD1P2-201ENST00000412936 992 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.27□□□□□ -1.73
POLR2AP24928 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.27□□□□□ -1.73
POLR2AP24928 AC127526.1-201ENST00000417526 366 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 AL035410.1-201ENST00000427409 427 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.27□□□□□ -1.73
POLR2AP24928 AC022022.1-201ENST00000430304 178 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.27□□□□□ -1.73
POLR2AP24928 AC079448.1-201ENST00000449377 373 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 FAM172BP-201ENST00000487497 1089 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.27□□□□□ -1.73
POLR2AP24928 Y_RNA.704-201ENST00000516851 102 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 AC090572.1-201ENST00000519251 160 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 AC107934.1-201ENST00000522215 217 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.27□□□□□ -1.73
POLR2AP24928 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
POLR2AP24928 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
POLR2AP24928 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.27□□□□□ -1.73
POLR2AP24928 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.27□□□□□ -1.73
POLR2AP24928 AC116312.1-201ENST00000606841 314 ntBASIC4.27□□□□□ -1.73
POLR2AP24928 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.27□□□□□ -1.73
POLR2AP24928 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
POLR2AP24928 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
POLR2AP24928 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.26□□□□□ -1.73
POLR2AP24928 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
POLR2AP24928 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
POLR2AP24928 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
POLR2AP24928 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
POLR2AP24928 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.26□□□□□ -1.73
POLR2AP24928 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
POLR2AP24928 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.26□□□□□ -1.73
POLR2AP24928 RNA5SP374-201ENST00000362939 125 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 AL356776.1-201ENST00000406574 447 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 MIR1305-201ENST00000408300 86 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 RNU6-272P-201ENST00000411028 104 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.26□□□□□ -1.73
POLR2AP24928 AC093156.1-201ENST00000440382 670 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 USP9YP15-201ENST00000442391 422 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.26□□□□□ -1.73
POLR2AP24928 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
POLR2AP24928 AC109925.1-201ENST00000478069 331 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 AC093809.1-201ENST00000509155 340 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.26□□□□□ -1.73
POLR2AP24928 AC010486.1-201ENST00000511793 424 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 AC023141.12-201ENST00000512399 199 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.26□□□□□ -1.73
POLR2AP24928 SNORA19.2-201ENST00000516013 114 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 RN7SKP83-201ENST00000516512 178 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 Y_RNA.693-201ENST00000516641 110 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.26□□□□□ -1.73
POLR2AP24928 AF279873.1-201ENST00000523393 313 ntBASIC4.26□□□□□ -1.73
POLR2AP24928 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
POLR2AP24928 AC107954.1-201ENST00000565906 727 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms