Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 RNA5SP42-201ENST00000364278 115 ntBASIC3.72□□□□□ -1.81
BDNFP23560 U3.39-201ENST00000408569 239 ntBASIC3.72□□□□□ -1.81
BDNFP23560 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
BDNFP23560 RNU6-193P-201ENST00000410977 107 ntBASIC3.72□□□□□ -1.81
BDNFP23560 AC017079.2-201ENST00000416102 485 ntBASIC3.72□□□□□ -1.81
BDNFP23560 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.72□□□□□ -1.81
BDNFP23560 AC006946.1-201ENST00000429106 328 ntBASIC3.72□□□□□ -1.81
BDNFP23560 MTCO3P45-201ENST00000443036 613 ntBASIC3.72□□□□□ -1.81
BDNFP23560 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.72□□□□□ -1.81
BDNFP23560 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.72□□□□□ -1.81
BDNFP23560 AC087588.1-201ENST00000462203 316 ntBASIC3.72□□□□□ -1.81
BDNFP23560 AL135752.1-201ENST00000479477 471 ntBASIC3.72□□□□□ -1.81
BDNFP23560 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
BDNFP23560 AC009901.1-201ENST00000506703 541 ntBASIC3.72□□□□□ -1.81
BDNFP23560 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.72□□□□□ -1.81
BDNFP23560 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.72□□□□□ -1.81
BDNFP23560 NRON-201ENST00000517270 370 ntBASIC3.72□□□□□ -1.81
BDNFP23560 MTCO2P15-201ENST00000532655 656 ntBASIC3.72□□□□□ -1.81
BDNFP23560 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.72□□□□□ -1.81
BDNFP23560 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.72□□□□□ -1.81
BDNFP23560 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.72□□□□□ -1.81
BDNFP23560 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.72□□□□□ -1.81
BDNFP23560 AC136618.2-201ENST00000575091 400 ntBASIC3.72□□□□□ -1.81
BDNFP23560 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.72□□□□□ -1.81
BDNFP23560 AC245884.10-201ENST00000597355 337 ntBASIC3.72□□□□□ -1.81
BDNFP23560 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.72□□□□□ -1.81
BDNFP23560 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.72□□□□□ -1.81
BDNFP23560 AC009464.1-201ENST00000615731 469 ntBASIC3.72□□□□□ -1.81
BDNFP23560 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.72□□□□□ -1.81
BDNFP23560 AP003399.1-201ENST00000637534 361 ntBASIC3.72□□□□□ -1.81
BDNFP23560 AC103706.2-201ENST00000638080 240 ntBASIC3.72□□□□□ -1.81
BDNFP23560 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.72□□□□□ -1.81
BDNFP23560 OR6C71P-202ENST00000641886 1107 ntBASIC3.72□□□□□ -1.81
BDNFP23560 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
BDNFP23560 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
BDNFP23560 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
BDNFP23560 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
BDNFP23560 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
BDNFP23560 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
BDNFP23560 SNORD46.1-201ENST00000364139 104 ntBASIC3.71□□□□□ -1.82
BDNFP23560 SNORA70.4-201ENST00000365509 134 ntBASIC3.71□□□□□ -1.82
BDNFP23560 SNORD17-201ENST00000390930 237 ntBASIC3.71□□□□□ -1.82
BDNFP23560 AL451054.2-201ENST00000420896 202 ntBASIC3.71□□□□□ -1.82
BDNFP23560 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.71□□□□□ -1.82
BDNFP23560 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.71□□□□□ -1.82
BDNFP23560 AC007919.1-201ENST00000429380 217 ntBASIC3.71□□□□□ -1.82
BDNFP23560 BNIP3P2-201ENST00000441221 577 ntBASIC3.71□□□□□ -1.82
BDNFP23560 FGF7P5-201ENST00000441829 291 ntBASIC3.71□□□□□ -1.82
BDNFP23560 AL591503.2-201ENST00000442314 1005 ntBASIC3.71□□□□□ -1.82
BDNFP23560 SNORD11.1-201ENST00000459482 85 ntBASIC3.71□□□□□ -1.82
BDNFP23560 RPL37P6-201ENST00000460682 294 ntBASIC3.71□□□□□ -1.82
BDNFP23560 RPS26P21-201ENST00000475397 348 ntBASIC3.71□□□□□ -1.82
BDNFP23560 RPS15AP36-201ENST00000492022 382 ntBASIC3.71□□□□□ -1.82
BDNFP23560 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.71□□□□□ -1.82
BDNFP23560 SUB1P1-201ENST00000524415 382 ntBASIC3.71□□□□□ -1.82
BDNFP23560 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.71□□□□□ -1.82
BDNFP23560 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.71□□□□□ -1.82
BDNFP23560 AC005498.1-201ENST00000592125 465 ntBASIC3.71□□□□□ -1.82
BDNFP23560 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.71□□□□□ -1.82
BDNFP23560 AC020895.1-201ENST00000595362 272 ntBASIC3.71□□□□□ -1.82
BDNFP23560 BNIP3P40-201ENST00000596017 556 ntBASIC3.71□□□□□ -1.82
BDNFP23560 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.71□□□□□ -1.82
BDNFP23560 SRGNP1-201ENST00000603392 451 ntBASIC3.71□□□□□ -1.82
BDNFP23560 ELOCP35-201ENST00000604289 336 ntBASIC3.71□□□□□ -1.82
BDNFP23560 AC144521.1-201ENST00000607148 956 ntBASIC3.71□□□□□ -1.82
BDNFP23560 AC103710.4-201ENST00000609301 899 ntBASIC3.71□□□□□ -1.82
BDNFP23560 MIR7975-201ENST00000619350 68 ntBASIC3.71□□□□□ -1.82
BDNFP23560 AC002064.3-201ENST00000623448 346 ntBASIC3.71□□□□□ -1.82
BDNFP23560 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.71□□□□□ -1.82
BDNFP23560 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
BDNFP23560 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.71□□□□□ -1.82
BDNFP23560 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
BDNFP23560 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
BDNFP23560 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
BDNFP23560 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
BDNFP23560 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
BDNFP23560 RNY4P24-201ENST00000362735 96 ntBASIC3.7□□□□□ -1.82
BDNFP23560 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
BDNFP23560 RAP1BP1-201ENST00000412709 553 ntBASIC3.7□□□□□ -1.82
BDNFP23560 SSR1P2-201ENST00000415208 787 ntBASIC3.7□□□□□ -1.82
BDNFP23560 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.7□□□□□ -1.82
BDNFP23560 AC099548.1-201ENST00000421443 426 ntBASIC3.7□□□□□ -1.82
BDNFP23560 AC097713.2-201ENST00000430199 356 ntBASIC3.7□□□□□ -1.82
BDNFP23560 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.7□□□□□ -1.82
BDNFP23560 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.7□□□□□ -1.82
BDNFP23560 UBE2FP3-201ENST00000436366 524 ntBASIC3.7□□□□□ -1.82
BDNFP23560 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
BDNFP23560 TPT1P14-201ENST00000448018 505 ntBASIC3.7□□□□□ -1.82
BDNFP23560 RNU7-59P-201ENST00000459101 61 ntBASIC3.7□□□□□ -1.82
BDNFP23560 snoU13.22-201ENST00000459428 104 ntBASIC3.7□□□□□ -1.82
BDNFP23560 AC008481.1-201ENST00000463278 396 ntBASIC3.7□□□□□ -1.82
BDNFP23560 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.7□□□□□ -1.82
BDNFP23560 AC023598.1-201ENST00000472521 361 ntBASIC3.7□□□□□ -1.82
BDNFP23560 RPL23AP41-201ENST00000484754 458 ntBASIC3.7□□□□□ -1.82
BDNFP23560 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
BDNFP23560 AL160314.1-201ENST00000490836 438 ntBASIC3.7□□□□□ -1.82
BDNFP23560 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.7□□□□□ -1.82
BDNFP23560 AC138853.1-201ENST00000503549 823 ntBASIC3.7□□□□□ -1.82
BDNFP23560 DSTNP2-201ENST00000504533 515 ntBASIC3.7□□□□□ -1.82
BDNFP23560 AC034244.1-201ENST00000507687 207 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms