Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.44□□□□□ -1.54
LMNB1P20700 AL118558.2-201ENST00000556294 238 ntBASIC5.44□□□□□ -1.54
LMNB1P20700 AL133153.1-201ENST00000557756 303 ntBASIC5.44□□□□□ -1.54
LMNB1P20700 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.44□□□□□ -1.54
LMNB1P20700 AL360085.1-201ENST00000604713 532 ntBASIC5.44□□□□□ -1.54
LMNB1P20700 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.44□□□□□ -1.54
LMNB1P20700 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.44□□□□□ -1.54
LMNB1P20700 AC079684.1-201ENST00000621405 437 ntBASIC5.44□□□□□ -1.54
LMNB1P20700 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
LMNB1P20700 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.44□□□□□ -1.54
LMNB1P20700 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.44□□□□□ -1.54
LMNB1P20700 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
LMNB1P20700 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.44□□□□□ -1.54
LMNB1P20700 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.44□□□□□ -1.54
LMNB1P20700 THAP12P5-201ENST00000405864 2275 ntBASIC5.44□□□□□ -1.54
LMNB1P20700 CPHL1P-201ENST00000461341 3407 ntBASIC5.44□□□□□ -1.54
LMNB1P20700 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMNB1P20700 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMNB1P20700 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
LMNB1P20700 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LMNB1P20700 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMNB1P20700 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMNB1P20700 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMNB1P20700 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.43□□□□□ -1.54
LMNB1P20700 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMNB1P20700 AL139276.1-201ENST00000311910 1001 ntBASIC5.43□□□□□ -1.54
LMNB1P20700 AC011155.1-201ENST00000316512 456 ntBASIC5.43□□□□□ -1.54
LMNB1P20700 HSPE1P11-201ENST00000339579 310 ntBASIC5.43□□□□□ -1.54
LMNB1P20700 RNU4-66P-201ENST00000365199 138 ntBASIC5.43□□□□□ -1.54
LMNB1P20700 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
LMNB1P20700 Y_RNA.431-201ENST00000384086 102 ntBASIC5.43□□□□□ -1.54
LMNB1P20700 RPL21P65-201ENST00000406094 466 ntBASIC5.43□□□□□ -1.54
LMNB1P20700 RNU2-36P-201ENST00000410361 191 ntBASIC5.43□□□□□ -1.54
LMNB1P20700 RN7SKP140-201ENST00000411196 284 ntBASIC5.43□□□□□ -1.54
LMNB1P20700 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.43□□□□□ -1.54
LMNB1P20700 RPS7P15-201ENST00000415804 584 ntBASIC5.43□□□□□ -1.54
LMNB1P20700 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.43□□□□□ -1.54
LMNB1P20700 PPP1R2P5-201ENST00000457256 603 ntBASIC5.43□□□□□ -1.54
LMNB1P20700 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.43□□□□□ -1.54
LMNB1P20700 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.43□□□□□ -1.54
LMNB1P20700 AP000857.1-201ENST00000532151 543 ntBASIC5.43□□□□□ -1.54
LMNB1P20700 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.43□□□□□ -1.54
LMNB1P20700 MIR4424-201ENST00000585257 86 ntBASIC5.43□□□□□ -1.54
LMNB1P20700 AL451044.1-201ENST00000604867 238 ntBASIC5.43□□□□□ -1.54
LMNB1P20700 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
LMNB1P20700 AC012442.3-202ENST00000636742 206 ntBASIC5.43□□□□□ -1.54
LMNB1P20700 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMNB1P20700 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMNB1P20700 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.43□□□□□ -1.54
LMNB1P20700 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
LMNB1P20700 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
LMNB1P20700 AC000374.1-201ENST00000434698 1745 ntBASIC5.43□□□□□ -1.54
LMNB1P20700 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LMNB1P20700 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.42□□□□□ -1.54
LMNB1P20700 AC007529.1-201ENST00000418574 2178 ntBASIC5.42□□□□□ -1.54
LMNB1P20700 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.42□□□□□ -1.54
LMNB1P20700 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LMNB1P20700 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LMNB1P20700 RNA5SP130-201ENST00000364431 114 ntBASIC5.42□□□□□ -1.54
LMNB1P20700 RNU6-1029P-201ENST00000384109 107 ntBASIC5.42□□□□□ -1.54
LMNB1P20700 MIR483-201ENST00000385070 76 ntBASIC5.42□□□□□ -1.54
LMNB1P20700 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LMNB1P20700 BTF3L4P3-201ENST00000418879 476 ntBASIC5.42□□□□□ -1.54
LMNB1P20700 HSPE1P1-201ENST00000421494 318 ntBASIC5.42□□□□□ -1.54
LMNB1P20700 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.42□□□□□ -1.54
LMNB1P20700 AL445584.1-201ENST00000431451 330 ntBASIC5.42□□□□□ -1.54
LMNB1P20700 ATP5HP2-201ENST00000433885 485 ntBASIC5.42□□□□□ -1.54
LMNB1P20700 KCTD9P3-201ENST00000434597 1169 ntBASIC5.42□□□□□ -1.54
LMNB1P20700 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.42□□□□□ -1.54
LMNB1P20700 AL162395.1-201ENST00000457882 422 ntBASIC5.42□□□□□ -1.54
LMNB1P20700 SNORD19B-201ENST00000459623 84 ntBASIC5.42□□□□□ -1.54
LMNB1P20700 AC116562.3-201ENST00000506136 177 ntBASIC5.42□□□□□ -1.54
LMNB1P20700 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.42□□□□□ -1.54
LMNB1P20700 FAM206BP-201ENST00000510179 541 ntBASIC5.42□□□□□ -1.54
LMNB1P20700 RNA5SP49-201ENST00000516450 115 ntBASIC5.42□□□□□ -1.54
LMNB1P20700 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.42□□□□□ -1.54
LMNB1P20700 AC011979.2-201ENST00000527568 352 ntBASIC5.42□□□□□ -1.54
LMNB1P20700 AC068587.5-201ENST00000528506 175 ntBASIC5.42□□□□□ -1.54
LMNB1P20700 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.42□□□□□ -1.54
LMNB1P20700 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.42□□□□□ -1.54
LMNB1P20700 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.42□□□□□ -1.54
LMNB1P20700 AL162730.1-201ENST00000605734 292 ntBASIC5.42□□□□□ -1.54
LMNB1P20700 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
LMNB1P20700 AC015914.2-201ENST00000618167 288 ntBASIC5.42□□□□□ -1.54
LMNB1P20700 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.42□□□□□ -1.54
LMNB1P20700 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
LMNB1P20700 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LMNB1P20700 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.42□□□□□ -1.54
LMNB1P20700 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.41□□□□□ -1.54
LMNB1P20700 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
LMNB1P20700 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.41□□□□□ -1.54
LMNB1P20700 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.41□□□□□ -1.54
LMNB1P20700 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LMNB1P20700 RNU6-641P-201ENST00000384006 107 ntBASIC5.41□□□□□ -1.54
LMNB1P20700 SNORA9-201ENST00000384215 133 ntBASIC5.41□□□□□ -1.54
LMNB1P20700 MIR3065-201ENST00000390137 79 ntBASIC5.41□□□□□ -1.54
LMNB1P20700 AL451054.2-201ENST00000420896 202 ntBASIC5.41□□□□□ -1.54
LMNB1P20700 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.41□□□□□ -1.54
LMNB1P20700 HMGB3P11-201ENST00000440127 604 ntBASIC5.41□□□□□ -1.54
LMNB1P20700 AL353748.1-201ENST00000440753 474 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms