Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MTCO2P31-201ENST00000402702 684 ntBASIC2.66□□□□□ -1.98
TPM1P09493 BEND7P1-201ENST00000422058 457 ntBASIC2.66□□□□□ -1.98
TPM1P09493 AC098614.2-201ENST00000426040 255 ntBASIC2.66□□□□□ -1.98
TPM1P09493 AL512637.2-201ENST00000431287 1256 ntBASIC2.66□□□□□ -1.98
TPM1P09493 TAAR7P-201ENST00000436141 242 ntBASIC2.66□□□□□ -1.98
TPM1P09493 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.66□□□□□ -1.98
TPM1P09493 AC241584.1-201ENST00000438469 1241 ntBASIC2.66□□□□□ -1.98
TPM1P09493 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.66□□□□□ -1.98
TPM1P09493 AC009237.8-201ENST00000445492 379 ntBASIC2.66□□□□□ -1.98
TPM1P09493 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.66□□□□□ -1.98
TPM1P09493 AC092155.2-201ENST00000454675 477 ntBASIC2.66□□□□□ -1.98
TPM1P09493 RBM43P1-201ENST00000476891 1081 ntBASIC2.66□□□□□ -1.98
TPM1P09493 AC090096.1-201ENST00000489168 390 ntBASIC2.66□□□□□ -1.98
TPM1P09493 EIF4EP3-201ENST00000498782 656 ntBASIC2.66□□□□□ -1.98
TPM1P09493 CAB39P1-201ENST00000502277 460 ntBASIC2.66□□□□□ -1.98
TPM1P09493 AC113420.1-201ENST00000507903 571 ntBASIC2.66□□□□□ -1.98
TPM1P09493 AC002456.2-201ENST00000509356 380 ntBASIC2.66□□□□□ -1.98
TPM1P09493 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.66□□□□□ -1.98
TPM1P09493 RNA5SP135-201ENST00000517019 125 ntBASIC2.66□□□□□ -1.98
TPM1P09493 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
TPM1P09493 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.66□□□□□ -1.98
TPM1P09493 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.66□□□□□ -1.98
TPM1P09493 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.66□□□□□ -1.98
TPM1P09493 MIR4658-201ENST00000584344 65 ntBASIC2.66□□□□□ -1.98
TPM1P09493 AC011471.1-201ENST00000585766 187 ntBASIC2.66□□□□□ -1.98
TPM1P09493 AC005498.1-201ENST00000592125 465 ntBASIC2.66□□□□□ -1.98
TPM1P09493 AC005229.3-201ENST00000603438 323 ntBASIC2.66□□□□□ -1.98
TPM1P09493 AC092608.2-201ENST00000624427 218 ntBASIC2.66□□□□□ -1.98
TPM1P09493 OR8B1P-202ENST00000641132 1178 ntBASIC2.66□□□□□ -1.98
TPM1P09493 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.98
TPM1P09493 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
TPM1P09493 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
TPM1P09493 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.65□□□□□ -1.99
TPM1P09493 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TPM1P09493 RNU6-878P-201ENST00000384578 110 ntBASIC2.65□□□□□ -1.99
TPM1P09493 MIR27B-201ENST00000385129 97 ntBASIC2.65□□□□□ -1.99
TPM1P09493 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TPM1P09493 RPL7P44-201ENST00000424827 742 ntBASIC2.65□□□□□ -1.99
TPM1P09493 FGF7P5-201ENST00000441829 291 ntBASIC2.65□□□□□ -1.99
TPM1P09493 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.65□□□□□ -1.99
TPM1P09493 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.65□□□□□ -1.99
TPM1P09493 AL031659.1-201ENST00000447075 539 ntBASIC2.65□□□□□ -1.99
TPM1P09493 MTCO1P48-201ENST00000448024 1096 ntBASIC2.65□□□□□ -1.99
TPM1P09493 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.65□□□□□ -1.99
TPM1P09493 AC233279.1-201ENST00000455300 423 ntBASIC2.65□□□□□ -1.99
TPM1P09493 GTF2IP12-201ENST00000456547 356 ntBASIC2.65□□□□□ -1.99
TPM1P09493 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.65□□□□□ -1.99
TPM1P09493 AL135752.1-201ENST00000479477 471 ntBASIC2.65□□□□□ -1.99
TPM1P09493 MTCYBP17-201ENST00000503579 789 ntBASIC2.65□□□□□ -1.99
TPM1P09493 SUB1P1-201ENST00000524415 382 ntBASIC2.65□□□□□ -1.99
TPM1P09493 MIR5694-201ENST00000581190 76 ntBASIC2.65□□□□□ -1.99
TPM1P09493 KATNBL1P1-201ENST00000605192 748 ntBASIC2.65□□□□□ -1.99
TPM1P09493 AC090132.2-201ENST00000615881 347 ntBASIC2.65□□□□□ -1.99
TPM1P09493 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.65□□□□□ -1.99
TPM1P09493 AC011330.2-201ENST00000621680 635 ntBASIC2.65□□□□□ -1.99
TPM1P09493 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
TPM1P09493 AL512506.2-201ENST00000624472 458 ntBASIC2.65□□□□□ -1.99
TPM1P09493 AP003399.1-201ENST00000637534 361 ntBASIC2.65□□□□□ -1.99
TPM1P09493 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TPM1P09493 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TPM1P09493 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
TPM1P09493 AL139039.1-201ENST00000401900 692 ntBASIC2.64□□□□□ -1.99
TPM1P09493 MORF4L1P6-201ENST00000418771 268 ntBASIC2.64□□□□□ -1.99
TPM1P09493 S100A11P2-201ENST00000467589 312 ntBASIC2.64□□□□□ -1.99
TPM1P09493 FAM172BP-201ENST00000487497 1089 ntBASIC2.64□□□□□ -1.99
TPM1P09493 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.64□□□□□ -1.99
TPM1P09493 AC118282.2-201ENST00000508739 374 ntBASIC2.64□□□□□ -1.99
TPM1P09493 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.64□□□□□ -1.99
TPM1P09493 RNU6-885P-201ENST00000516607 104 ntBASIC2.64□□□□□ -1.99
TPM1P09493 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.64□□□□□ -1.99
TPM1P09493 AC087808.1-201ENST00000520501 361 ntBASIC2.64□□□□□ -1.99
TPM1P09493 OR4R2P-201ENST00000530815 597 ntBASIC2.64□□□□□ -1.99
TPM1P09493 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.64□□□□□ -1.99
TPM1P09493 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.64□□□□□ -1.99
TPM1P09493 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.64□□□□□ -1.99
TPM1P09493 MIR3944-201ENST00000581277 108 ntBASIC2.64□□□□□ -1.99
TPM1P09493 ELOCP29-201ENST00000588193 334 ntBASIC2.64□□□□□ -1.99
TPM1P09493 AL671309.1-201ENST00000603750 544 ntBASIC2.64□□□□□ -1.99
TPM1P09493 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.64□□□□□ -1.99
TPM1P09493 AC010872.1-201ENST00000624225 675 ntBASIC2.64□□□□□ -1.99
TPM1P09493 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.64□□□□□ -1.99
TPM1P09493 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.64□□□□□ -1.99
TPM1P09493 DBF4P1-201ENST00000412976 1892 ntBASIC2.64□□□□□ -1.99
TPM1P09493 AL137003.2-201ENST00000606924 2538 ntBASIC2.64□□□□□ -1.99
TPM1P09493 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
TPM1P09493 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.63□□□□□ -1.99
TPM1P09493 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
TPM1P09493 MIR21-201ENST00000362134 72 ntBASIC2.63□□□□□ -1.99
TPM1P09493 OR1L1-202ENST00000373686 1083 ntBASIC2.63□□□□□ -1.99
TPM1P09493 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
TPM1P09493 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.63□□□□□ -1.99
TPM1P09493 AL122016.1-201ENST00000403365 367 ntBASIC2.63□□□□□ -1.99
TPM1P09493 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.63□□□□□ -1.99
TPM1P09493 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.63□□□□□ -1.99
TPM1P09493 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.63□□□□□ -1.99
TPM1P09493 PSMA6P3-201ENST00000428242 164 ntBASIC2.63□□□□□ -1.99
TPM1P09493 ATP5F1P1-201ENST00000433775 569 ntBASIC2.63□□□□□ -1.99
TPM1P09493 RPL26P6-201ENST00000440913 438 ntBASIC2.63□□□□□ -1.99
TPM1P09493 RPL21P133-201ENST00000443666 476 ntBASIC2.63□□□□□ -1.99
TPM1P09493 DPPA3P1-201ENST00000448050 469 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms