Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DOAP06340 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
HLA-DOAP06340 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DOAP06340 MTND5P17-201ENST00000418405 1603 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DOAP06340 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DOAP06340 RNU4-76P-201ENST00000364509 141 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 Y_RNA.263-201ENST00000364659 114 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 RNA5SP51-201ENST00000364750 119 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 Y_RNA.279-201ENST00000364763 95 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.44□□□□□ -1.7
HLA-DOAP06340 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DOAP06340 snosnR66.1-201ENST00000391095 99 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 AL024474.1-201ENST00000404655 591 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 AL603766.1-201ENST00000407763 664 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 ATP5A1P2-201ENST00000412323 255 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DOAP06340 ZNF90P2-204ENST00000419323 1075 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DOAP06340 NANOGP6-201ENST00000429190 847 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 RPL23AP74-201ENST00000437246 471 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 SNORA71B-202ENST00000439232 272 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DOAP06340 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DOAP06340 AC084198.1-201ENST00000477747 402 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DOAP06340 AC106707.2-201ENST00000484182 374 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DOAP06340 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DOAP06340 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DOAP06340 AC104057.1-201ENST00000515547 497 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DOAP06340 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DOAP06340 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DOAP06340 CBX3P5-201ENST00000552017 521 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 AL359212.1-201ENST00000556608 614 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 MIR3118-1-201ENST00000581787 76 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.44□□□□□ -1.7
HLA-DOAP06340 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.44□□□□□ -1.7
HLA-DOAP06340 AC044792.1-201ENST00000593294 196 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 AC068790.5-201ENST00000602741 355 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 U3.45-201ENST00000607547 219 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 AC135507.2-201ENST00000612443 309 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 MIR6864-201ENST00000617935 70 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 AC009159.1-201ENST00000618386 642 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 CYP3A51P-201ENST00000633513 256 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 AC010149.2-201ENST00000637608 315 ntBASIC4.44□□□□□ -1.7
HLA-DOAP06340 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DOAP06340 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DOAP06340 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DOAP06340 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
HLA-DOAP06340 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DOAP06340 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DOAP06340 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DOAP06340 ELL2P4-201ENST00000446870 1376 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DOAP06340 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DOAP06340 RNA5SP52-201ENST00000362448 134 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 RNU4-73P-201ENST00000363164 141 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 RNU6-359P-201ENST00000365466 108 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 RN7SKP285-201ENST00000410137 318 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 AC093578.1-201ENST00000415219 368 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 SDCBPP3-201ENST00000419629 891 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DOAP06340 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DOAP06340 ELOCP18-201ENST00000434209 337 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 RPS20P32-201ENST00000456044 356 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 PABPC1P3-201ENST00000469174 459 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 RPL7P49-201ENST00000471402 708 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 RN7SL809P-201ENST00000482040 297 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 RPL39P36-201ENST00000490784 156 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 AP001025.2-201ENST00000490908 477 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 AC093767.1-201ENST00000504523 156 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 RFPL4AP5-201ENST00000514977 504 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 AC107934.1-201ENST00000522215 217 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DOAP06340 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DOAP06340 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DOAP06340 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DOAP06340 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DOAP06340 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DOAP06340 AC090877.1-201ENST00000561418 344 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DOAP06340 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DOAP06340 AC007621.1-201ENST00000604544 437 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 AL137849.1-201ENST00000604767 169 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 AL136363.1-201ENST00000605349 337 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 AC087045.1-201ENST00000605856 382 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 OR10AB1P-201ENST00000609613 938 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HLA-DOAP06340 AP003122.6-201ENST00000623831 495 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 AC091953.2-201ENST00000623979 160 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
HLA-DOAP06340 AC092125.1-201ENST00000562568 1995 ntBASIC4.43□□□□□ -1.7
HLA-DOAP06340 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DOAP06340 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DOAP06340 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DOAP06340 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HLA-DOAP06340 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DOAP06340 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms