Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL645568.3-201ENST00000433683 316 ntBASIC1.47□□□□□ -2.17
SPTA1P02549 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.47□□□□□ -2.17
SPTA1P02549 RFC5P1-201ENST00000454419 874 ntBASIC1.47□□□□□ -2.17
SPTA1P02549 AC021146.7-201ENST00000509604 775 ntBASIC1.47□□□□□ -2.17
SPTA1P02549 Y_RNA.675-201ENST00000516389 149 ntBASIC1.47□□□□□ -2.17
SPTA1P02549 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.47□□□□□ -2.17
SPTA1P02549 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.47□□□□□ -2.17
SPTA1P02549 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
SPTA1P02549 RNU1-22P-201ENST00000363334 158 ntBASIC1.47□□□□□ -2.17
SPTA1P02549 SNORA67.6-201ENST00000391093 99 ntBASIC1.47□□□□□ -2.17
SPTA1P02549 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.47□□□□□ -2.17
SPTA1P02549 RPL34P26-201ENST00000445636 354 ntBASIC1.47□□□□□ -2.17
SPTA1P02549 COX6CP14-201ENST00000469580 174 ntBASIC1.47□□□□□ -2.17
SPTA1P02549 AC104435.1-201ENST00000483483 166 ntBASIC1.47□□□□□ -2.17
SPTA1P02549 AC090071.1-201ENST00000507713 644 ntBASIC1.47□□□□□ -2.17
SPTA1P02549 TBCAP3-201ENST00000512475 312 ntBASIC1.47□□□□□ -2.17
SPTA1P02549 MIR1273G-201ENST00000577677 100 ntBASIC1.47□□□□□ -2.17
SPTA1P02549 AC002546.1-201ENST00000588041 2504 ntBASIC1.47□□□□□ -2.17
SPTA1P02549 SRIP3-201ENST00000413200 219 ntBASIC1.46□□□□□ -2.18
SPTA1P02549 AC023128.2-201ENST00000420880 1223 ntBASIC1.46□□□□□ -2.18
SPTA1P02549 AC005297.2-201ENST00000450430 606 ntBASIC1.46□□□□□ -2.18
SPTA1P02549 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC1.46□□□□□ -2.18
SPTA1P02549 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.46□□□□□ -2.18
SPTA1P02549 GLYCAM1-201ENST00000546596 285 ntBASIC1.46□□□□□ -2.18
SPTA1P02549 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.46□□□□□ -2.18
SPTA1P02549 KATNBL1P1-201ENST00000605192 748 ntBASIC1.46□□□□□ -2.18
SPTA1P02549 AC016877.3-201ENST00000606778 504 ntBASIC1.46□□□□□ -2.18
SPTA1P02549 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SPTA1P02549 Y_RNA.390-201ENST00000383932 102 ntBASIC1.46□□□□□ -2.18
SPTA1P02549 RPL19P1-201ENST00000411635 428 ntBASIC1.46□□□□□ -2.18
SPTA1P02549 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.46□□□□□ -2.18
SPTA1P02549 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.46□□□□□ -2.18
SPTA1P02549 RNU6-717P-201ENST00000459076 104 ntBASIC1.46□□□□□ -2.18
SPTA1P02549 AC069528.1-202ENST00000482888 637 ntBASIC1.46□□□□□ -2.18
SPTA1P02549 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.46□□□□□ -2.18
SPTA1P02549 CR383656.8-201ENST00000549046 145 ntBASIC1.46□□□□□ -2.18
SPTA1P02549 RNU6-84P-201ENST00000607737 102 ntBASIC1.46□□□□□ -2.18
SPTA1P02549 AP002967.1-201ENST00000624203 539 ntBASIC1.46□□□□□ -2.18
SPTA1P02549 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.45□□□□□ -2.18
SPTA1P02549 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.45□□□□□ -2.18
SPTA1P02549 RPL21P2-201ENST00000440049 481 ntBASIC1.45□□□□□ -2.18
SPTA1P02549 RPL39P40-201ENST00000445481 146 ntBASIC1.45□□□□□ -2.18
SPTA1P02549 NPM1P52-201ENST00000518264 846 ntBASIC1.45□□□□□ -2.18
SPTA1P02549 MTATP6P3-201ENST00000581686 676 ntBASIC1.45□□□□□ -2.18
SPTA1P02549 MIR4448-201ENST00000584360 86 ntBASIC1.45□□□□□ -2.18
SPTA1P02549 AC022513.1-201ENST00000624512 117 ntBASIC1.45□□□□□ -2.18
SPTA1P02549 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.45□□□□□ -2.18
SPTA1P02549 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.45□□□□□ -2.18
SPTA1P02549 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
SPTA1P02549 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SPTA1P02549 AC025263.3-201ENST00000622965 1396 ntBASIC1.45□□□□□ -2.18
SPTA1P02549 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.45□□□□□ -2.18
SPTA1P02549 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
SPTA1P02549 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
SPTA1P02549 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.45□□□□□ -2.18
SPTA1P02549 RNA5SP338-201ENST00000410495 85 ntBASIC1.45□□□□□ -2.18
SPTA1P02549 EBAG9P1-201ENST00000418955 543 ntBASIC1.45□□□□□ -2.18
SPTA1P02549 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.45□□□□□ -2.18
SPTA1P02549 HMGB3P15-201ENST00000507326 574 ntBASIC1.45□□□□□ -2.18
SPTA1P02549 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.45□□□□□ -2.18
SPTA1P02549 RNA5SP121-201ENST00000516537 101 ntBASIC1.45□□□□□ -2.18
SPTA1P02549 AC068135.2-201ENST00000569293 1028 ntBASIC1.45□□□□□ -2.18
SPTA1P02549 MIR5000-201ENST00000577717 103 ntBASIC1.45□□□□□ -2.18
SPTA1P02549 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SPTA1P02549 ZNF209P-201ENST00000593450 2304 ntBASIC1.44□□□□□ -2.18
SPTA1P02549 RNA5SP127-201ENST00000411051 133 ntBASIC1.44□□□□□ -2.18
SPTA1P02549 MTCO1P48-201ENST00000448024 1096 ntBASIC1.44□□□□□ -2.18
SPTA1P02549 AL021397.1-201ENST00000451806 248 ntBASIC1.44□□□□□ -2.18
SPTA1P02549 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.44□□□□□ -2.18
SPTA1P02549 AC012181.1-201ENST00000479895 423 ntBASIC1.44□□□□□ -2.18
SPTA1P02549 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.44□□□□□ -2.18
SPTA1P02549 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.44□□□□□ -2.18
SPTA1P02549 AC103810.8-201ENST00000607347 118 ntBASIC1.44□□□□□ -2.18
SPTA1P02549 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SPTA1P02549 AC009452.1-201ENST00000640823 606 ntBASIC1.44□□□□□ -2.18
SPTA1P02549 ZNF355P-201ENST00000427301 3216 ntBASIC1.44□□□□□ -2.18
SPTA1P02549 RNU6-53P-201ENST00000365367 106 ntBASIC1.44□□□□□ -2.18
SPTA1P02549 AL513185.2-201ENST00000425543 193 ntBASIC1.44□□□□□ -2.18
SPTA1P02549 RPS15AP36-201ENST00000492022 382 ntBASIC1.44□□□□□ -2.18
SPTA1P02549 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SPTA1P02549 RPPH1-2P-201ENST00000516688 293 ntBASIC1.44□□□□□ -2.18
SPTA1P02549 AC007375.1-201ENST00000554513 578 ntBASIC1.44□□□□□ -2.18
SPTA1P02549 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.44□□□□□ -2.18
SPTA1P02549 AL049779.4-201ENST00000604500 156 ntBASIC1.44□□□□□ -2.18
SPTA1P02549 AL592494.3-201ENST00000609485 464 ntBASIC1.44□□□□□ -2.18
SPTA1P02549 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
SPTA1P02549 NUP58P1-201ENST00000502546 1738 ntBASIC1.43□□□□□ -2.18
SPTA1P02549 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.43□□□□□ -2.18
SPTA1P02549 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC1.43□□□□□ -2.18
SPTA1P02549 RPL23AP29-201ENST00000397284 453 ntBASIC1.43□□□□□ -2.18
SPTA1P02549 BX510359.4-201ENST00000423750 193 ntBASIC1.43□□□□□ -2.18
SPTA1P02549 HMGN2P19-201ENST00000425149 265 ntBASIC1.43□□□□□ -2.18
SPTA1P02549 RPS6P15-201ENST00000431996 751 ntBASIC1.43□□□□□ -2.18
SPTA1P02549 SNRPFP3-201ENST00000457792 225 ntBASIC1.43□□□□□ -2.18
SPTA1P02549 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.43□□□□□ -2.18
SPTA1P02549 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.43□□□□□ -2.18
SPTA1P02549 AC109464.2-201ENST00000510242 943 ntBASIC1.43□□□□□ -2.18
SPTA1P02549 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.43□□□□□ -2.18
SPTA1P02549 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.43□□□□□ -2.18
SPTA1P02549 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms