Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 NDUFA5P10-201ENST00000432147 357 ntBASIC2.02□□□□□ -2.09
COL4A1P02462 AL031659.1-201ENST00000447075 539 ntBASIC2.02□□□□□ -2.09
COL4A1P02462 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A1P02462 ARPC3P2-201ENST00000457786 533 ntBASIC2.02□□□□□ -2.09
COL4A1P02462 HMGB1P47-201ENST00000511281 589 ntBASIC2.02□□□□□ -2.09
COL4A1P02462 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.02□□□□□ -2.09
COL4A1P02462 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
COL4A1P02462 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.02□□□□□ -2.09
COL4A1P02462 AC103987.3-201ENST00000582071 292 ntBASIC2.02□□□□□ -2.09
COL4A1P02462 AL133393.1-201ENST00000603277 287 ntBASIC2.02□□□□□ -2.09
COL4A1P02462 BX248123.2-201ENST00000606318 124 ntBASIC2.02□□□□□ -2.09
COL4A1P02462 AL391834.1-201ENST00000609609 560 ntBASIC2.02□□□□□ -2.09
COL4A1P02462 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL4A1P02462 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
COL4A1P02462 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COL4A1P02462 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
COL4A1P02462 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
COL4A1P02462 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
COL4A1P02462 AL512504.1-201ENST00000415494 778 ntBASIC2.01□□□□□ -2.09
COL4A1P02462 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.01□□□□□ -2.09
COL4A1P02462 AC023512.1-201ENST00000444513 499 ntBASIC2.01□□□□□ -2.09
COL4A1P02462 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.01□□□□□ -2.09
COL4A1P02462 RNU7-27P-201ENST00000459281 62 ntBASIC2.01□□□□□ -2.09
COL4A1P02462 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
COL4A1P02462 AL163540.1-201ENST00000485382 386 ntBASIC2.01□□□□□ -2.09
COL4A1P02462 AC068781.1-201ENST00000488231 618 ntBASIC2.01□□□□□ -2.09
COL4A1P02462 RPS15AP36-201ENST00000492022 382 ntBASIC2.01□□□□□ -2.09
COL4A1P02462 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.01□□□□□ -2.09
COL4A1P02462 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.01□□□□□ -2.09
COL4A1P02462 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.01□□□□□ -2.09
COL4A1P02462 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.01□□□□□ -2.09
COL4A1P02462 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.01□□□□□ -2.09
COL4A1P02462 AC135803.1-201ENST00000608748 565 ntBASIC2.01□□□□□ -2.09
COL4A1P02462 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.01□□□□□ -2.09
COL4A1P02462 AC010872.1-201ENST00000624225 675 ntBASIC2.01□□□□□ -2.09
COL4A1P02462 OR1S1-201ENST00000624470 978 ntBASIC2.01□□□□□ -2.09
COL4A1P02462 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2□□□□□ -2.09
COL4A1P02462 RNU6-666P-201ENST00000363499 107 ntBASIC2□□□□□ -2.09
COL4A1P02462 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2□□□□□ -2.09
COL4A1P02462 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2□□□□□ -2.09
COL4A1P02462 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2□□□□□ -2.09
COL4A1P02462 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2□□□□□ -2.09
COL4A1P02462 RPS29P29-201ENST00000456396 171 ntBASIC2□□□□□ -2.09
COL4A1P02462 RNU6-1218P-201ENST00000458990 108 ntBASIC2□□□□□ -2.09
COL4A1P02462 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2□□□□□ -2.09
COL4A1P02462 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2□□□□□ -2.09
COL4A1P02462 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2□□□□□ -2.09
COL4A1P02462 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2□□□□□ -2.09
COL4A1P02462 AL355816.1-201ENST00000607951 118 ntBASIC2□□□□□ -2.09
COL4A1P02462 AC055764.2-201ENST00000610089 670 ntBASIC2□□□□□ -2.09
COL4A1P02462 AC131902.3-201ENST00000611767 581 ntBASIC2□□□□□ -2.09
COL4A1P02462 AC091046.2-201ENST00000620775 665 ntBASIC2□□□□□ -2.09
COL4A1P02462 AC011978.2-201ENST00000569835 2054 ntBASIC2□□□□□ -2.09
COL4A1P02462 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.99□□□□□ -2.09
COL4A1P02462 Z98749.2-208ENST00000381646 500 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 RNU4-31P-201ENST00000384211 141 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 Z86062.1-201ENST00000406773 777 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
COL4A1P02462 RNU6-174P-201ENST00000410406 106 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 RNA5SP489-201ENST00000410986 109 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 MTND4P11-201ENST00000417020 1058 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 TRGV6-201ENST00000417928 299 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 MTND4LP7-201ENST00000431728 294 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 AC109583.1-201ENST00000432156 268 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.99□□□□□ -2.09
COL4A1P02462 AC090255.1-201ENST00000495779 349 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.99□□□□□ -2.09
COL4A1P02462 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.99□□□□□ -2.09
COL4A1P02462 RNA5SP480-201ENST00000516840 109 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 RN7SKP96-201ENST00000516948 297 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.99□□□□□ -2.09
COL4A1P02462 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.99□□□□□ -2.09
COL4A1P02462 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.99□□□□□ -2.09
COL4A1P02462 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.99□□□□□ -2.09
COL4A1P02462 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.99□□□□□ -2.09
COL4A1P02462 AC068714.1-201ENST00000559623 800 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 RPL23AP88-201ENST00000605759 454 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 uc_338.5-201ENST00000611839 155 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 AC011890.2-201ENST00000613393 294 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 AC090897.3-201ENST00000636973 1157 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL4A1P02462 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
COL4A1P02462 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL4A1P02462 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
COL4A1P02462 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
COL4A1P02462 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
COL4A1P02462 RNU6-244P-201ENST00000391028 104 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 MTND3P20-201ENST00000407663 186 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 HMGN2P35-201ENST00000412164 270 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 AC004965.1-201ENST00000413033 213 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 ZFAND6P1-201ENST00000434138 605 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 MTND2P21-201ENST00000436242 1042 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 HMGN2P20-201ENST00000437531 273 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 RPL23AP16-201ENST00000441715 421 ntBASIC1.99□□□□□ -2.09
COL4A1P02462 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.99□□□□□ -2.09
COL4A1P02462 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
COL4A1P02462 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.99□□□□□ -2.09
COL4A1P02462 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.99□□□□□ -2.09
COL4A1P02462 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.99□□□□□ -2.09
COL4A1P02462 AC015720.1-201ENST00000565251 277 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms