Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.05□□□□□ -1.76
TOP3BO95985 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.05□□□□□ -1.76
TOP3BO95985 AC005255.1-201ENST00000593748 216 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 AC104662.1-201ENST00000604448 511 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 AC007363.1-201ENST00000604736 620 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.05□□□□□ -1.76
TOP3BO95985 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.05□□□□□ -1.76
TOP3BO95985 AC015967.1-201ENST00000619893 476 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.05□□□□□ -1.76
TOP3BO95985 AL136221.1-201ENST00000621449 509 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 PISRT1-201ENST00000626175 531 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
TOP3BO95985 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TOP3BO95985 AC011978.2-201ENST00000569835 2054 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 AC130650.2-201ENST00000618736 2403 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TOP3BO95985 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TOP3BO95985 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
TOP3BO95985 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TOP3BO95985 Z82217.1-201ENST00000625157 8149 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.05□□□□□ -1.76
TOP3BO95985 ZNF680P1-201ENST00000436625 1469 ntBASIC4.05□□□□□ -1.76
TOP3BO95985 AC116667.1-201ENST00000604855 2072 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 FAM35DP-201ENST00000323387 2712 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TOP3BO95985 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.04□□□□□ -1.76
TOP3BO95985 Y_RNA.1-201ENST00000352915 104 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 U8.3-201ENST00000363321 132 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
TOP3BO95985 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TOP3BO95985 RNU6-877P-201ENST00000383868 107 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 Y_RNA.409-201ENST00000383990 98 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 SNORA5A-201ENST00000384111 134 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 RNU6-1103P-201ENST00000384150 107 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 Y_RNA.509-201ENST00000384506 99 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 U8.11-201ENST00000384699 133 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 U8.12-201ENST00000384701 133 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 RNVU1-14-201ENST00000384770 164 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 MIR183-201ENST00000384958 110 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 DHFRP6-201ENST00000401776 268 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 RPS15AP40-201ENST00000419621 391 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.04□□□□□ -1.76
TOP3BO95985 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.04□□□□□ -1.76
TOP3BO95985 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.04□□□□□ -1.76
TOP3BO95985 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.04□□□□□ -1.76
TOP3BO95985 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.04□□□□□ -1.76
TOP3BO95985 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.04□□□□□ -1.76
TOP3BO95985 PPIAP3-201ENST00000450588 505 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 FDX1P2-201ENST00000450769 375 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.04□□□□□ -1.76
TOP3BO95985 OR6K1P-201ENST00000456766 971 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 RPL36AP13-201ENST00000457490 317 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 U8.18-201ENST00000459285 133 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 RPS20P21-201ENST00000466859 343 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 AL136126.1-201ENST00000473603 402 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 RBM43P1-201ENST00000476891 1081 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 AC090453.1-201ENST00000495560 436 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.04□□□□□ -1.76
TOP3BO95985 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.04□□□□□ -1.76
TOP3BO95985 AC018710.1-201ENST00000506509 158 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 AC114786.4-201ENST00000508771 728 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 RPL23AP94-201ENST00000512518 302 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 HSPA8P13-201ENST00000523715 472 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.04□□□□□ -1.76
TOP3BO95985 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.04□□□□□ -1.76
TOP3BO95985 AC024224.1-201ENST00000538284 609 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 AL512360.1-201ENST00000555346 234 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.04□□□□□ -1.76
TOP3BO95985 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.04□□□□□ -1.76
TOP3BO95985 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.04□□□□□ -1.76
TOP3BO95985 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.04□□□□□ -1.76
TOP3BO95985 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.04□□□□□ -1.76
TOP3BO95985 MIR4458-201ENST00000578872 75 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 MIR3682-201ENST00000581338 84 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 MIR5195-201ENST00000583555 115 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.04□□□□□ -1.76
TOP3BO95985 AC025449.1-201ENST00000603896 529 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 BCRP9-201ENST00000605312 388 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 AC007038.2-201ENST00000608095 740 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.04□□□□□ -1.76
TOP3BO95985 MIR7151-201ENST00000617477 60 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 AC126177.8-201ENST00000618339 1015 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.04□□□□□ -1.76
TOP3BO95985 AC103858.2-201ENST00000621471 543 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 AL445264.1-201ENST00000621719 171 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 AC010338.1-201ENST00000621823 717 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 FER-210ENST00000628534 558 ntTSL 5 BASIC4.04□□□□□ -1.76
TOP3BO95985 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
TOP3BO95985 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TOP3BO95985 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
TOP3BO95985 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
TOP3BO95985 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.04□□□□□ -1.76
TOP3BO95985 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TOP3BO95985 AL139811.1-201ENST00000424779 2299 ntBASIC4.04□□□□□ -1.76
TOP3BO95985 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TOP3BO95985 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TOP3BO95985 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TOP3BO95985 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
TOP3BO95985 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TOP3BO95985 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms