Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AP004289.2-201ENST00000444413 1457 ntBASIC3.47□□□□□ -1.85
NKX2-2O95096 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NKX2-2O95096 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
NKX2-2O95096 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
NKX2-2O95096 AC008725.1-201ENST00000605123 2263 ntBASIC3.46□□□□□ -1.85
NKX2-2O95096 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 RNA5SP515-201ENST00000364570 118 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 Y_RNA.359-201ENST00000365498 102 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 RNU6-1119P-201ENST00000384349 108 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 RPL23AP32-201ENST00000395315 459 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 RNU2-8P-201ENST00000410727 190 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 RNU2-62P-201ENST00000410868 191 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 RN7SKP263-201ENST00000411194 309 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 RNA5SP107-201ENST00000411358 122 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX2-2O95096 ELOCP17-201ENST00000414751 326 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 RPL27AP8-201ENST00000424277 446 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 AC019097.1-201ENST00000424783 735 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX2-2O95096 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.46□□□□□ -1.86
NKX2-2O95096 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.46□□□□□ -1.86
NKX2-2O95096 AC093156.1-201ENST00000440382 670 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 TXNP1-201ENST00000441872 371 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 AL662791.1-201ENST00000441992 928 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX2-2O95096 AC016696.1-201ENST00000446949 318 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 GAPDHP17-201ENST00000449858 1001 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.46□□□□□ -1.86
NKX2-2O95096 MTCO3P20-201ENST00000454926 688 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.46□□□□□ -1.86
NKX2-2O95096 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.46□□□□□ -1.86
NKX2-2O95096 AC008481.1-201ENST00000463278 396 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX2-2O95096 NDUFB4P2-201ENST00000509515 391 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 CDC42P4-201ENST00000510507 563 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 SNORA70.16-201ENST00000516390 95 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 NARSP2-201ENST00000518524 679 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX2-2O95096 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.46□□□□□ -1.86
NKX2-2O95096 TOMM20P2-201ENST00000540082 421 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
NKX2-2O95096 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX2-2O95096 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX2-2O95096 OR4H12P-201ENST00000556269 907 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.46□□□□□ -1.86
NKX2-2O95096 MIR4528-201ENST00000577763 90 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 MIR5187-201ENST00000583479 76 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 AC020914.4-201ENST00000597690 277 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 DUXAP4-201ENST00000603046 613 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 AP002826.1-201ENST00000608835 315 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 AC103710.1-201ENST00000610003 901 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 AC004696.1-201ENST00000614345 607 ntBASIC3.46□□□□□ -1.86
NKX2-2O95096 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.46□□□□□ -1.86
NKX2-2O95096 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
NKX2-2O95096 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
NKX2-2O95096 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NKX2-2O95096 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
NKX2-2O95096 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
NKX2-2O95096 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NKX2-2O95096 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NKX2-2O95096 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NKX2-2O95096 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.45□□□□□ -1.86
NKX2-2O95096 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
NKX2-2O95096 RNU5E-1-201ENST00000362477 120 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 RNU5A-1-201ENST00000362698 116 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 RNY3P13-201ENST00000365542 102 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
NKX2-2O95096 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
NKX2-2O95096 RN7SKP159-201ENST00000410657 292 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 AL663109.1-201ENST00000411498 844 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 RPL21P24-201ENST00000413752 448 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX2-2O95096 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.45□□□□□ -1.86
NKX2-2O95096 RPS29P7-201ENST00000439662 171 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 RABEPKP1-201ENST00000440529 1026 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX2-2O95096 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.45□□□□□ -1.86
NKX2-2O95096 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.45□□□□□ -1.86
NKX2-2O95096 TPTE2P5-203ENST00000458118 728 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 AL133162.1-201ENST00000463228 453 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 AC010587.1-201ENST00000505809 469 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NKX2-2O95096 HMGB3P15-201ENST00000507326 574 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.45□□□□□ -1.86
NKX2-2O95096 AL359273.1-201ENST00000510918 627 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 RN7SKP83-201ENST00000516512 178 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 SNORA18.6-201ENST00000516792 115 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX2-2O95096 RFPL1S-203ENST00000539579 330 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.45□□□□□ -1.86
NKX2-2O95096 HSPE1P5-201ENST00000561489 272 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.45□□□□□ -1.86
NKX2-2O95096 MIR5685-201ENST00000579080 79 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 ZNF415P1-201ENST00000582279 1166 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.45□□□□□ -1.86
NKX2-2O95096 NRBF2P1-201ENST00000587407 859 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 AC008277.2-201ENST00000605196 797 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 RNU1-30P-201ENST00000606575 163 ntBASIC3.45□□□□□ -1.86
NKX2-2O95096 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.45□□□□□ -1.86
NKX2-2O95096 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms