Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 RNU4-60P-201ENST00000517239 135 ntBASIC5.4□□□□□ -1.54
PRPF40AO75400 OR5D15P-201ENST00000531671 942 ntBASIC5.4□□□□□ -1.54
PRPF40AO75400 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF40AO75400 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF40AO75400 AC106782.4-201ENST00000568264 210 ntBASIC5.4□□□□□ -1.54
PRPF40AO75400 MIR5699-201ENST00000578903 90 ntBASIC5.4□□□□□ -1.54
PRPF40AO75400 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.4□□□□□ -1.54
PRPF40AO75400 SNORD84-203ENST00000584275 78 ntBASIC5.4□□□□□ -1.54
PRPF40AO75400 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.4□□□□□ -1.54
PRPF40AO75400 AL670379.4-201ENST00000605279 254 ntBASIC5.4□□□□□ -1.54
PRPF40AO75400 AL133255.1-201ENST00000606374 441 ntBASIC5.4□□□□□ -1.54
PRPF40AO75400 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PRPF40AO75400 uc_338.15-201ENST00000615470 191 ntBASIC5.4□□□□□ -1.54
PRPF40AO75400 AC126177.8-201ENST00000618339 1015 ntBASIC5.4□□□□□ -1.54
PRPF40AO75400 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PRPF40AO75400 AC007998.5-201ENST00000622938 237 ntBASIC5.4□□□□□ -1.54
PRPF40AO75400 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
PRPF40AO75400 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PRPF40AO75400 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.4□□□□□ -1.55
PRPF40AO75400 AC103710.2-202ENST00000641454 2853 ntBASIC5.4□□□□□ -1.55
PRPF40AO75400 AC099654.2-201ENST00000433031 1980 ntBASIC5.4□□□□□ -1.55
PRPF40AO75400 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.4□□□□□ -1.55
PRPF40AO75400 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.4□□□□□ -1.55
PRPF40AO75400 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF40AO75400 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF40AO75400 RNU1-82P-201ENST00000390851 165 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.39□□□□□ -1.55
PRPF40AO75400 RPL21P91-201ENST00000429231 479 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.39□□□□□ -1.55
PRPF40AO75400 HMGB3P11-201ENST00000440127 604 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 RPL7AP28-201ENST00000464513 571 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 MTND4P17-201ENST00000470444 350 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 RPL23AP65-201ENST00000475608 468 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.39□□□□□ -1.55
PRPF40AO75400 NIP7P2-201ENST00000485801 544 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 RPS23P1-201ENST00000491662 432 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 AC108022.1-201ENST00000493466 478 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 RBBP4P6-201ENST00000508098 202 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 AC098591.2-201ENST00000510152 315 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF40AO75400 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.39□□□□□ -1.55
PRPF40AO75400 AC100770.1-201ENST00000532310 322 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.39□□□□□ -1.55
PRPF40AO75400 MIR3934-201ENST00000579806 107 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.39□□□□□ -1.55
PRPF40AO75400 AC011487.3-201ENST00000593607 453 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 RPL7P50-201ENST00000600588 727 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 AC092747.3-201ENST00000603769 301 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 CTHRC1P1-201ENST00000605383 469 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 AL158032.1-201ENST00000605401 106 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 AC012409.4-201ENST00000612923 249 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 AC006065.5-201ENST00000623427 349 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 AL133216.2-202ENST00000634512 349 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 MIR6715B-201ENST00000637172 77 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PRPF40AO75400 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PRPF40AO75400 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PRPF40AO75400 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF40AO75400 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF40AO75400 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF40AO75400 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PRPF40AO75400 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.39□□□□□ -1.55
PRPF40AO75400 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
PRPF40AO75400 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF40AO75400 DDX18P3-201ENST00000404856 2007 ntBASIC5.38□□□□□ -1.55
PRPF40AO75400 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.38□□□□□ -1.55
PRPF40AO75400 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PRPF40AO75400 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.38□□□□□ -1.55
PRPF40AO75400 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF40AO75400 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.38□□□□□ -1.55
PRPF40AO75400 RNA5SP28-201ENST00000363841 119 ntBASIC5.38□□□□□ -1.55
PRPF40AO75400 RNU6-82P-201ENST00000363970 107 ntBASIC5.38□□□□□ -1.55
PRPF40AO75400 AL583834.1-201ENST00000406943 343 ntBASIC5.38□□□□□ -1.55
PRPF40AO75400 RPL7AP73-201ENST00000413490 353 ntBASIC5.38□□□□□ -1.55
PRPF40AO75400 PPP1R11P2-201ENST00000423543 382 ntBASIC5.38□□□□□ -1.55
PRPF40AO75400 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.38□□□□□ -1.55
PRPF40AO75400 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.38□□□□□ -1.55
PRPF40AO75400 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF40AO75400 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF40AO75400 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF40AO75400 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF40AO75400 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF40AO75400 RNU6-864P-201ENST00000516256 108 ntBASIC5.38□□□□□ -1.55
PRPF40AO75400 RNU6-273P-201ENST00000516937 96 ntBASIC5.38□□□□□ -1.55
PRPF40AO75400 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF40AO75400 AC018630.1-201ENST00000541376 925 ntBASIC5.38□□□□□ -1.55
PRPF40AO75400 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.38□□□□□ -1.55
PRPF40AO75400 OR4H12P-201ENST00000556269 907 ntBASIC5.38□□□□□ -1.55
PRPF40AO75400 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF40AO75400 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.38□□□□□ -1.55
PRPF40AO75400 AC008521.1-201ENST00000587471 187 ntBASIC5.38□□□□□ -1.55
PRPF40AO75400 AC022726.1-201ENST00000587475 207 ntBASIC5.38□□□□□ -1.55
PRPF40AO75400 BNIP3P25-201ENST00000596023 559 ntBASIC5.38□□□□□ -1.55
PRPF40AO75400 AL138889.2-201ENST00000603883 242 ntBASIC5.38□□□□□ -1.55
PRPF40AO75400 MIR7154-201ENST00000620673 73 ntBASIC5.38□□□□□ -1.55
PRPF40AO75400 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.38□□□□□ -1.55
PRPF40AO75400 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.38□□□□□ -1.55
PRPF40AO75400 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
PRPF40AO75400 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PRPF40AO75400 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms