Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
PRKNO60260 RNA5SP119-201ENST00000362715 117 ntBASIC3.33□□□□□ -1.88
PRKNO60260 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PRKNO60260 RNU5A-6P-201ENST00000384136 116 ntBASIC3.33□□□□□ -1.88
PRKNO60260 RNU6-356P-201ENST00000384140 107 ntBASIC3.33□□□□□ -1.88
PRKNO60260 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PRKNO60260 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PRKNO60260 RNU6-821P-201ENST00000390995 107 ntBASIC3.33□□□□□ -1.88
PRKNO60260 Y_RNA.582-201ENST00000391023 95 ntBASIC3.33□□□□□ -1.88
PRKNO60260 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.33□□□□□ -1.88
PRKNO60260 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.33□□□□□ -1.88
PRKNO60260 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.33□□□□□ -1.88
PRKNO60260 UBE2V1P10-201ENST00000414685 269 ntBASIC3.33□□□□□ -1.88
PRKNO60260 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.33□□□□□ -1.88
PRKNO60260 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.33□□□□□ -1.88
PRKNO60260 EZH2P1-201ENST00000431167 291 ntBASIC3.33□□□□□ -1.88
PRKNO60260 MTND1P4-201ENST00000435196 415 ntBASIC3.33□□□□□ -1.88
PRKNO60260 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.33□□□□□ -1.88
PRKNO60260 AC010655.1-201ENST00000449336 292 ntBASIC3.33□□□□□ -1.88
PRKNO60260 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.33□□□□□ -1.88
PRKNO60260 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.33□□□□□ -1.88
PRKNO60260 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.33□□□□□ -1.88
PRKNO60260 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.33□□□□□ -1.88
PRKNO60260 TMED11P-201ENST00000479478 690 ntBASIC3.33□□□□□ -1.88
PRKNO60260 AC025518.1-201ENST00000479856 347 ntBASIC3.33□□□□□ -1.88
PRKNO60260 AC021382.1-201ENST00000483523 359 ntBASIC3.33□□□□□ -1.88
PRKNO60260 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.33□□□□□ -1.88
PRKNO60260 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.33□□□□□ -1.88
PRKNO60260 TMEM248P1-201ENST00000510579 951 ntBASIC3.33□□□□□ -1.88
PRKNO60260 PTGES3P3-201ENST00000511479 482 ntBASIC3.33□□□□□ -1.88
PRKNO60260 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.33□□□□□ -1.88
PRKNO60260 RNA5SP309-201ENST00000516670 106 ntBASIC3.33□□□□□ -1.88
PRKNO60260 RNU4-60P-201ENST00000517239 135 ntBASIC3.33□□□□□ -1.88
PRKNO60260 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
PRKNO60260 AC022616.6-201ENST00000520479 119 ntBASIC3.33□□□□□ -1.88
PRKNO60260 OR5B10P-201ENST00000532869 642 ntBASIC3.33□□□□□ -1.88
PRKNO60260 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.33□□□□□ -1.88
PRKNO60260 AC123904.2-201ENST00000548059 300 ntBASIC3.33□□□□□ -1.88
PRKNO60260 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.33□□□□□ -1.88
PRKNO60260 AC103710.1-201ENST00000610003 901 ntBASIC3.33□□□□□ -1.88
PRKNO60260 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.33□□□□□ -1.88
PRKNO60260 U73479.1-201ENST00000618062 168 ntBASIC3.33□□□□□ -1.88
PRKNO60260 AC009159.1-201ENST00000618386 642 ntBASIC3.33□□□□□ -1.88
PRKNO60260 AL732618.1-201ENST00000623251 301 ntBASIC3.33□□□□□ -1.88
PRKNO60260 AC079597.1-201ENST00000624306 508 ntBASIC3.33□□□□□ -1.88
PRKNO60260 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.33□□□□□ -1.88
PRKNO60260 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PRKNO60260 AC068137.3-201ENST00000639191 341 ntBASIC3.33□□□□□ -1.88
PRKNO60260 AC073869.6-201ENST00000640656 341 ntBASIC3.33□□□□□ -1.88
PRKNO60260 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.33□□□□□ -1.88
PRKNO60260 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
PRKNO60260 MTCO1P24-201ENST00000515438 1558 ntBASIC3.33□□□□□ -1.88
PRKNO60260 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PRKNO60260 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PRKNO60260 MTND5P26-201ENST00000426018 1752 ntBASIC3.33□□□□□ -1.88
PRKNO60260 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.32□□□□□ -1.88
PRKNO60260 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PRKNO60260 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PRKNO60260 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PRKNO60260 GNG5P1-201ENST00000255500 204 ntBASIC3.32□□□□□ -1.88
PRKNO60260 Y_RNA.6-201ENST00000362350 114 ntBASIC3.32□□□□□ -1.88
PRKNO60260 U8.3-201ENST00000363321 132 ntBASIC3.32□□□□□ -1.88
PRKNO60260 RNU1-89P-201ENST00000384592 164 ntBASIC3.32□□□□□ -1.88
PRKNO60260 MIR1183-201ENST00000408856 89 ntBASIC3.32□□□□□ -1.88
PRKNO60260 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.32□□□□□ -1.88
PRKNO60260 AC092447.6-201ENST00000414578 210 ntBASIC3.32□□□□□ -1.88
PRKNO60260 BX295541.1-201ENST00000417774 250 ntBASIC3.32□□□□□ -1.88
PRKNO60260 MTCYBP24-201ENST00000420387 1106 ntBASIC3.32□□□□□ -1.88
PRKNO60260 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.32□□□□□ -1.88
PRKNO60260 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.32□□□□□ -1.88
PRKNO60260 ISCA1P6-201ENST00000427740 390 ntBASIC3.32□□□□□ -1.88
PRKNO60260 C8orf59P1-201ENST00000429930 303 ntBASIC3.32□□□□□ -1.88
PRKNO60260 AC073063.1-201ENST00000434352 607 ntBASIC3.32□□□□□ -1.88
PRKNO60260 AC112653.1-201ENST00000443851 386 ntBASIC3.32□□□□□ -1.88
PRKNO60260 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.32□□□□□ -1.88
PRKNO60260 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.32□□□□□ -1.88
PRKNO60260 AC104308.1-201ENST00000454621 333 ntBASIC3.32□□□□□ -1.88
PRKNO60260 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.32□□□□□ -1.88
PRKNO60260 AC034236.1-201ENST00000469891 373 ntBASIC3.32□□□□□ -1.88
PRKNO60260 AC084357.1-201ENST00000473404 255 ntBASIC3.32□□□□□ -1.88
PRKNO60260 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.32□□□□□ -1.88
PRKNO60260 AC068305.1-201ENST00000497406 726 ntBASIC3.32□□□□□ -1.88
PRKNO60260 AF213884.2-201ENST00000510417 903 ntBASIC3.32□□□□□ -1.88
PRKNO60260 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.32□□□□□ -1.88
PRKNO60260 RNU2-46P-201ENST00000517038 113 ntBASIC3.32□□□□□ -1.88
PRKNO60260 RNU6-430P-201ENST00000517078 107 ntBASIC3.32□□□□□ -1.88
PRKNO60260 RNU6-201P-201ENST00000517100 61 ntBASIC3.32□□□□□ -1.88
PRKNO60260 AP003497.1-201ENST00000528472 562 ntBASIC3.32□□□□□ -1.88
PRKNO60260 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PRKNO60260 AP000907.2-201ENST00000530827 353 ntBASIC3.32□□□□□ -1.88
PRKNO60260 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PRKNO60260 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.32□□□□□ -1.88
PRKNO60260 AC087883.1-201ENST00000551882 391 ntBASIC3.32□□□□□ -1.88
PRKNO60260 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.32□□□□□ -1.88
PRKNO60260 AL360157.1-201ENST00000565962 87 ntBASIC3.32□□□□□ -1.88
PRKNO60260 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.32□□□□□ -1.88
PRKNO60260 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.32□□□□□ -1.88
PRKNO60260 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
PRKNO60260 AC060771.1-201ENST00000582031 164 ntBASIC3.32□□□□□ -1.88
PRKNO60260 UBE2L4-201ENST00000587688 464 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms