Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AL714022.1-201ENST00000439897 151 ntBASIC2.32□□□□□ -2.04
SGCEO43556 AC009296.1-201ENST00000443146 155 ntBASIC2.32□□□□□ -2.04
SGCEO43556 AC116337.2-201ENST00000477662 156 ntBASIC2.32□□□□□ -2.04
SGCEO43556 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SGCEO43556 AC147055.4-201ENST00000504399 745 ntBASIC2.32□□□□□ -2.04
SGCEO43556 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.32□□□□□ -2.04
SGCEO43556 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.32□□□□□ -2.04
SGCEO43556 COX6CP8-201ENST00000522620 226 ntBASIC2.32□□□□□ -2.04
SGCEO43556 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.32□□□□□ -2.04
SGCEO43556 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.32□□□□□ -2.04
SGCEO43556 PRELID2P1-201ENST00000552837 301 ntBASIC2.32□□□□□ -2.04
SGCEO43556 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.32□□□□□ -2.04
SGCEO43556 RN7SL622P-201ENST00000585292 275 ntBASIC2.32□□□□□ -2.04
SGCEO43556 AC005498.1-201ENST00000592125 465 ntBASIC2.32□□□□□ -2.04
SGCEO43556 MIR6895-201ENST00000613497 78 ntBASIC2.32□□□□□ -2.04
SGCEO43556 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SGCEO43556 AC073308.1-201ENST00000623696 305 ntBASIC2.32□□□□□ -2.04
SGCEO43556 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.32□□□□□ -2.04
SGCEO43556 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.32□□□□□ -2.04
SGCEO43556 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SGCEO43556 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.32□□□□□ -2.04
SGCEO43556 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.31□□□□□ -2.04
SGCEO43556 FRG1BP-201ENST00000278882 761 ntBASIC2.31□□□□□ -2.04
SGCEO43556 AL139276.1-201ENST00000311910 1001 ntBASIC2.31□□□□□ -2.04
SGCEO43556 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
SGCEO43556 TAS2R15P-201ENST00000390674 928 ntBASIC2.31□□□□□ -2.04
SGCEO43556 RNU6-932P-201ENST00000391108 106 ntBASIC2.31□□□□□ -2.04
SGCEO43556 RPS20P25-201ENST00000412447 352 ntBASIC2.31□□□□□ -2.04
SGCEO43556 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.31□□□□□ -2.04
SGCEO43556 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.31□□□□□ -2.04
SGCEO43556 AL513175.2-201ENST00000422071 443 ntBASIC2.31□□□□□ -2.04
SGCEO43556 COTL1P1-201ENST00000422309 375 ntBASIC2.31□□□□□ -2.04
SGCEO43556 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
SGCEO43556 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.31□□□□□ -2.04
SGCEO43556 RPS15AP27-201ENST00000449183 343 ntBASIC2.31□□□□□ -2.04
SGCEO43556 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.31□□□□□ -2.04
SGCEO43556 RNU7-140P-201ENST00000459546 60 ntBASIC2.31□□□□□ -2.04
SGCEO43556 AC097462.2-201ENST00000504623 481 ntBASIC2.31□□□□□ -2.04
SGCEO43556 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.31□□□□□ -2.04
SGCEO43556 AC113420.1-201ENST00000507903 571 ntBASIC2.31□□□□□ -2.04
SGCEO43556 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.31□□□□□ -2.04
SGCEO43556 AC109464.2-201ENST00000510242 943 ntBASIC2.31□□□□□ -2.04
SGCEO43556 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.31□□□□□ -2.04
SGCEO43556 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.31□□□□□ -2.04
SGCEO43556 AC022483.1-201ENST00000514020 567 ntBASIC2.31□□□□□ -2.04
SGCEO43556 RNU6-1102P-201ENST00000516149 96 ntBASIC2.31□□□□□ -2.04
SGCEO43556 RNU6-1282P-201ENST00000516735 96 ntBASIC2.31□□□□□ -2.04
SGCEO43556 RNU6-928P-201ENST00000516876 104 ntBASIC2.31□□□□□ -2.04
SGCEO43556 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.31□□□□□ -2.04
SGCEO43556 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.31□□□□□ -2.04
SGCEO43556 IGLV3-17-201ENST00000519099 244 ntBASIC2.31□□□□□ -2.04
SGCEO43556 AC100870.1-201ENST00000522035 505 ntBASIC2.31□□□□□ -2.04
SGCEO43556 AC090502.2-201ENST00000549267 280 ntBASIC2.31□□□□□ -2.04
SGCEO43556 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.31□□□□□ -2.04
SGCEO43556 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.31□□□□□ -2.04
SGCEO43556 LINC00557-201ENST00000563184 1279 ntBASIC2.31□□□□□ -2.04
SGCEO43556 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.31□□□□□ -2.04
SGCEO43556 TPMTP1-201ENST00000592307 737 ntBASIC2.31□□□□□ -2.04
SGCEO43556 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.31□□□□□ -2.04
SGCEO43556 AL671309.1-201ENST00000603750 544 ntBASIC2.31□□□□□ -2.04
SGCEO43556 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.31□□□□□ -2.04
SGCEO43556 AC007619.2-201ENST00000605743 379 ntBASIC2.31□□□□□ -2.04
SGCEO43556 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
SGCEO43556 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.31□□□□□ -2.04
SGCEO43556 AC080188.3-201ENST00000624842 748 ntBASIC2.31□□□□□ -2.04
SGCEO43556 OR5H6-203ENST00000642105 978 ntBASIC2.31□□□□□ -2.04
SGCEO43556 AL022578.1-201ENST00000439330 1433 ntBASIC2.31□□□□□ -2.04
SGCEO43556 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.31□□□□□ -2.04
SGCEO43556 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.31□□□□□ -2.04
SGCEO43556 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.31□□□□□ -2.04
SGCEO43556 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.31□□□□□ -2.04
SGCEO43556 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SGCEO43556 RNU6-270P-201ENST00000364131 105 ntBASIC2.3□□□□□ -2.04
SGCEO43556 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SGCEO43556 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SGCEO43556 RNU2-28P-201ENST00000410457 189 ntBASIC2.3□□□□□ -2.04
SGCEO43556 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.3□□□□□ -2.04
SGCEO43556 TAAR7P-201ENST00000436141 242 ntBASIC2.3□□□□□ -2.04
SGCEO43556 AC000041.1-201ENST00000439655 175 ntBASIC2.3□□□□□ -2.04
SGCEO43556 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.3□□□□□ -2.04
SGCEO43556 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.3□□□□□ -2.04
SGCEO43556 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.3□□□□□ -2.04
SGCEO43556 AC013828.1-201ENST00000481845 158 ntBASIC2.3□□□□□ -2.04
SGCEO43556 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.3□□□□□ -2.04
SGCEO43556 BOLA3P3-201ENST00000505182 232 ntBASIC2.3□□□□□ -2.04
SGCEO43556 AC025768.1-201ENST00000510057 267 ntBASIC2.3□□□□□ -2.04
SGCEO43556 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SGCEO43556 SETP12-201ENST00000514068 805 ntBASIC2.3□□□□□ -2.04
SGCEO43556 RNA5SP471-201ENST00000516971 106 ntBASIC2.3□□□□□ -2.04
SGCEO43556 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.3□□□□□ -2.04
SGCEO43556 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.3□□□□□ -2.04
SGCEO43556 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.3□□□□□ -2.04
SGCEO43556 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.3□□□□□ -2.04
SGCEO43556 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.3□□□□□ -2.04
SGCEO43556 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.3□□□□□ -2.04
SGCEO43556 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.3□□□□□ -2.04
SGCEO43556 OR1M4P-201ENST00000589199 287 ntBASIC2.3□□□□□ -2.04
SGCEO43556 AL645944.1-201ENST00000603857 493 ntBASIC2.3□□□□□ -2.04
SGCEO43556 AP005137.2-201ENST00000609238 400 ntBASIC2.3□□□□□ -2.04
SGCEO43556 BX664608.1-201ENST00000610519 487 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms