Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 RNU6-76P-201ENST00000384060 104 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 RNU5A-2P-201ENST00000384337 116 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 MIR183-201ENST00000384958 110 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 AL591034.1-201ENST00000407447 340 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 RNU6-516P-201ENST00000411381 104 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN4O14493 BX842559.1-201ENST00000419615 532 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN4O14493 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN4O14493 AC092641.1-201ENST00000440229 772 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 MTND1P26-201ENST00000440488 538 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 RPL21P23-201ENST00000446654 460 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 AL592447.1-201ENST00000447592 540 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN4O14493 ZNF114P1-201ENST00000453500 292 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN4O14493 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN4O14493 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN4O14493 AC026784.1-201ENST00000507986 352 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN4O14493 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN4O14493 AP001804.3-201ENST00000525146 880 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.32□□□□□ -1.88
CLDN4O14493 AL133271.1-201ENST00000538229 291 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN4O14493 MRPS36P5-201ENST00000551909 298 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN4O14493 AC037471.2-201ENST00000564941 598 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 MIR4307-201ENST00000582802 84 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 MIR5195-201ENST00000583555 115 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN4O14493 PRELID3BP8-201ENST00000604148 295 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 AP002826.1-201ENST00000608835 315 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 AC122133.1-201ENST00000613964 233 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 AL603755.1-201ENST00000619504 163 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN4O14493 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN4O14493 AC005832.2-201ENST00000538921 1430 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 MFSD8-233ENST00000641482 4860 ntBASIC3.32□□□□□ -1.88
CLDN4O14493 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN4O14493 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CLDN4O14493 AL079305.1-201ENST00000623159 3008 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.31□□□□□ -1.88
CLDN4O14493 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN4O14493 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN4O14493 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN4O14493 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN4O14493 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CLDN4O14493 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN4O14493 CCT4P2-201ENST00000233836 1548 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 MTCO1P12-201ENST00000414273 1543 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN4O14493 MTND5P33-201ENST00000571250 1450 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 RNA5SP295-201ENST00000362655 121 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 Y_RNA.97-201ENST00000363094 102 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 RNU6-283P-201ENST00000364788 107 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
CLDN4O14493 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN4O14493 MIR493-201ENST00000385254 89 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 SKINT1L-201ENST00000401057 817 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 RN7SKP53-201ENST00000411337 315 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 TPMTP3-201ENST00000411928 735 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN4O14493 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN4O14493 PPP1R11P2-201ENST00000423543 382 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 UBE2D3P2-201ENST00000424409 445 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.31□□□□□ -1.88
CLDN4O14493 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN4O14493 AL512649.1-201ENST00000428997 581 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN4O14493 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.31□□□□□ -1.88
CLDN4O14493 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN4O14493 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN4O14493 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN4O14493 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN4O14493 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.31□□□□□ -1.88
CLDN4O14493 AP1S2P1-201ENST00000457344 379 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN4O14493 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN4O14493 AC112198.1-201ENST00000505369 1220 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.31□□□□□ -1.88
CLDN4O14493 AC116347.2-201ENST00000514912 523 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.31□□□□□ -1.88
CLDN4O14493 SNORA70.16-201ENST00000516390 95 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 SNORA70.18-201ENST00000516696 98 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 SNORA31.22-201ENST00000517204 135 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 OR5B10P-201ENST00000532869 642 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN4O14493 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN4O14493 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.31□□□□□ -1.88
CLDN4O14493 AC090888.1-201ENST00000561335 1141 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 PCMTD1P2-201ENST00000565017 355 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 AC055876.1-202ENST00000567053 138 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 AC011260.1-201ENST00000578420 472 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 AC105224.1-201ENST00000587055 421 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN4O14493 AC006557.5-201ENST00000603126 811 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 AL592295.2-201ENST00000612578 206 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 U4.6-201ENST00000621618 127 ntBASIC3.31□□□□□ -1.88
CLDN4O14493 AC112204.3-201ENST00000623822 332 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms