Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TPMTP2-201ENST00000414372 726 ntBASIC3.44□□□□□ -1.86
O00370 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.44□□□□□ -1.86
O00370 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.44□□□□□ -1.86
O00370 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.44□□□□□ -1.86
O00370 AL158156.1-201ENST00000422509 473 ntBASIC3.44□□□□□ -1.86
O00370 AL035407.1-201ENST00000429211 571 ntBASIC3.44□□□□□ -1.86
O00370 MTCYBP45-201ENST00000435243 565 ntBASIC3.44□□□□□ -1.86
O00370 CST9LP2-201ENST00000437612 320 ntBASIC3.44□□□□□ -1.86
O00370 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.44□□□□□ -1.86
O00370 AC009969.1-201ENST00000438726 172 ntBASIC3.44□□□□□ -1.86
O00370 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.44□□□□□ -1.86
O00370 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
O00370 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.44□□□□□ -1.86
O00370 USP9YP10-201ENST00000454868 628 ntBASIC3.44□□□□□ -1.86
O00370 RN7SL601P-201ENST00000471221 293 ntBASIC3.44□□□□□ -1.86
O00370 RN7SL283P-201ENST00000489055 303 ntBASIC3.44□□□□□ -1.86
O00370 AC093278.1-201ENST00000494700 600 ntBASIC3.44□□□□□ -1.86
O00370 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.44□□□□□ -1.86
O00370 RPF2P2-201ENST00000504693 896 ntBASIC3.44□□□□□ -1.86
O00370 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
O00370 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.44□□□□□ -1.86
O00370 AC118465.1-201ENST00000513820 1271 ntBASIC3.44□□□□□ -1.86
O00370 MTND5P4-201ENST00000514978 288 ntBASIC3.44□□□□□ -1.86
O00370 AC022690.1-201ENST00000526681 550 ntBASIC3.44□□□□□ -1.86
O00370 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.44□□□□□ -1.86
O00370 MIR2682-201ENST00000580305 110 ntBASIC3.44□□□□□ -1.86
O00370 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.44□□□□□ -1.86
O00370 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.44□□□□□ -1.86
O00370 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.44□□□□□ -1.86
O00370 BNIP3P23-201ENST00000599655 511 ntBASIC3.44□□□□□ -1.86
O00370 AC012669.1-201ENST00000603209 283 ntBASIC3.44□□□□□ -1.86
O00370 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.44□□□□□ -1.86
O00370 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.44□□□□□ -1.86
O00370 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.44□□□□□ -1.86
O00370 AC092192.1-201ENST00000633154 1018 ntBASIC3.44□□□□□ -1.86
O00370 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
O00370 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
O00370 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
O00370 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.44□□□□□ -1.86
O00370 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.43□□□□□ -1.86
O00370 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.43□□□□□ -1.86
O00370 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
O00370 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
O00370 OR5H2-201ENST00000355273 945 ntBASIC3.43□□□□□ -1.86
O00370 Y_RNA.302-201ENST00000364997 102 ntBASIC3.43□□□□□ -1.86
O00370 RNA5SP88-201ENST00000365560 109 ntBASIC3.43□□□□□ -1.86
O00370 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
O00370 SNORA48.8-201ENST00000391324 134 ntBASIC3.43□□□□□ -1.86
O00370 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.43□□□□□ -1.86
O00370 HMGB1P17-201ENST00000403495 628 ntBASIC3.43□□□□□ -1.86
O00370 AC007899.1-201ENST00000412776 775 ntBASIC3.43□□□□□ -1.86
O00370 AC107081.1-201ENST00000414975 361 ntBASIC3.43□□□□□ -1.86
O00370 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
O00370 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.43□□□□□ -1.86
O00370 MTND4P20-201ENST00000424125 869 ntBASIC3.43□□□□□ -1.86
O00370 OR2AS1P-201ENST00000427827 319 ntBASIC3.43□□□□□ -1.86
O00370 MTND5P14-201ENST00000441481 1267 ntBASIC3.43□□□□□ -1.86
O00370 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.43□□□□□ -1.86
O00370 Z99127.3-201ENST00000448158 395 ntBASIC3.43□□□□□ -1.86
O00370 ARPC3P5-201ENST00000448802 534 ntBASIC3.43□□□□□ -1.86
O00370 HMGB1P25-201ENST00000468402 607 ntBASIC3.43□□□□□ -1.86
O00370 BET1P1-201ENST00000482276 359 ntBASIC3.43□□□□□ -1.86
O00370 HMGB1P36-201ENST00000487709 576 ntBASIC3.43□□□□□ -1.86
O00370 AC110794.1-201ENST00000505816 425 ntBASIC3.43□□□□□ -1.86
O00370 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.43□□□□□ -1.86
O00370 LTV1P1-201ENST00000510683 1237 ntBASIC3.43□□□□□ -1.86
O00370 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.43□□□□□ -1.86
O00370 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.43□□□□□ -1.86
O00370 SNORA31.8-201ENST00000516327 108 ntBASIC3.43□□□□□ -1.86
O00370 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.43□□□□□ -1.86
O00370 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.43□□□□□ -1.86
O00370 ERHP1-201ENST00000523006 310 ntBASIC3.43□□□□□ -1.86
O00370 AP001804.3-201ENST00000525146 880 ntBASIC3.43□□□□□ -1.86
O00370 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.43□□□□□ -1.86
O00370 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.43□□□□□ -1.86
O00370 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.43□□□□□ -1.86
O00370 FAM60BP-201ENST00000578364 658 ntBASIC3.43□□□□□ -1.86
O00370 AC090616.2-202ENST00000584248 222 ntBASIC3.43□□□□□ -1.86
O00370 AL390208.1-201ENST00000605885 644 ntBASIC3.43□□□□□ -1.86
O00370 RNU6-88P-201ENST00000606801 100 ntBASIC3.43□□□□□ -1.86
O00370 AC024560.3-201ENST00000608482 349 ntBASIC3.43□□□□□ -1.86
O00370 MIR7112-201ENST00000616126 65 ntBASIC3.43□□□□□ -1.86
O00370 AL356266.1-201ENST00000623311 483 ntBASIC3.43□□□□□ -1.86
O00370 AC009039.2-201ENST00000624524 529 ntBASIC3.43□□□□□ -1.86
O00370 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.43□□□□□ -1.86
O00370 SNORA50A-202ENST00000629536 136 ntBASIC3.43□□□□□ -1.86
O00370 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
O00370 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
O00370 AL049780.3-201ENST00000624612 1583 ntBASIC3.42□□□□□ -1.86
O00370 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
O00370 AC008264.2-201ENST00000610193 3731 ntBASIC3.42□□□□□ -1.86
O00370 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
O00370 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
O00370 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
O00370 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
O00370 RPL21P3-201ENST00000395517 478 ntBASIC3.42□□□□□ -1.86
O00370 AL049545.1-201ENST00000401856 572 ntBASIC3.42□□□□□ -1.86
O00370 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
O00370 RNA5SP120-201ENST00000410900 112 ntBASIC3.42□□□□□ -1.86
O00370 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms