Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 TPT1P8-201ENST00000510120 555 ntBASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 SCARNA17.1-201ENST00000516211 143 ntBASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 RNU6-311P-201ENST00000516224 102 ntBASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 SCARNA17.2-201ENST00000516334 143 ntBASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 MIR2276-201ENST00000516886 89 ntBASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 RNA5SP471-201ENST00000516971 106 ntBASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 SCARNA1-201ENST00000517138 166 ntBASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 AC068657.1-201ENST00000520807 306 ntBASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 COX6CP5-201ENST00000527162 228 ntBASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 MIR3138-201ENST00000585238 82 ntBASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 BCRP9-201ENST00000605312 388 ntBASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 AC013562.2-201ENST00000611632 603 ntBASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 SCARNA17.4-201ENST00000614296 143 ntBASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 AC103798.2-201ENST00000624292 632 ntBASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 AP000553.6-201ENST00000641242 118 ntBASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
HMGB1P1B2RPK0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.65□□□□□ -1.82
HMGB1P1B2RPK0 RNA5SP435-201ENST00000364044 108 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 MIR888-201ENST00000401186 77 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 SPTLC1P2-201ENST00000407089 121 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 USP9YP13-201ENST00000417797 480 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 USP9YP26-201ENST00000421008 661 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 RPS27AP7-201ENST00000422792 455 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 AC098614.2-201ENST00000426040 255 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 AC092427.1-202ENST00000430569 476 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 FCF1P1-201ENST00000432690 571 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 OR2B8P-201ENST00000432841 938 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 SETD6P1-201ENST00000444575 317 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 AC074386.1-201ENST00000476560 767 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 EIF4EP3-201ENST00000498782 656 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 AC113155.1-201ENST00000511141 769 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 SNORA64.4-201ENST00000516632 81 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 AC104027.1-201ENST00000521887 300 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 AC007536.1-201ENST00000533382 349 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 AC061975.8-201ENST00000587058 721 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 AC239868.4-201ENST00000608318 671 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 AL136295.6-201ENST00000610486 658 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 AC091953.3-201ENST00000623220 236 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HMGB1P1B2RPK0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 RNU6-1167P-201ENST00000363227 94 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 RNU4-6P-201ENST00000410804 122 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 ELOCP19-201ENST00000411919 318 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 RPL7P8-201ENST00000411964 730 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 DNAJC19P7-201ENST00000428811 344 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 AL035246.1-201ENST00000433554 1255 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 PDSS1P2-201ENST00000449397 678 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 AC010618.1-201ENST00000469924 477 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 UQCRHP4-201ENST00000471686 272 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 RN7SL177P-201ENST00000476596 299 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 AC091167.1-201ENST00000492017 396 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 RNA5SP385-201ENST00000515947 110 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 RNU6-927P-201ENST00000516199 100 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 SNORA70.19-201ENST00000516717 90 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 RNA5SP165-201ENST00000517142 115 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 SUB1P1-201ENST00000524415 382 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 MIR4436B2-201ENST00000581415 91 ntBASIC3.64□□□□□ -1.83
HMGB1P1B2RPK0 RN7SL600P-201ENST00000581811 299 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms