Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.34□□□□□ -2.2
COL6A5A8TX70 CKAP2P1-201ENST00000555477 2049 ntBASIC1.33□□□□□ -2.2
COL6A5A8TX70 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
COL6A5A8TX70 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
COL6A5A8TX70 SAR1AP2-201ENST00000392696 594 ntBASIC1.33□□□□□ -2.2
COL6A5A8TX70 AC073310.1-201ENST00000423226 1033 ntBASIC1.33□□□□□ -2.2
COL6A5A8TX70 MTCO3P30-201ENST00000426425 670 ntBASIC1.33□□□□□ -2.2
COL6A5A8TX70 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.33□□□□□ -2.2
COL6A5A8TX70 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
COL6A5A8TX70 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.33□□□□□ -2.2
COL6A5A8TX70 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.33□□□□□ -2.2
COL6A5A8TX70 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
COL6A5A8TX70 MTND1P18-201ENST00000448191 573 ntBASIC1.33□□□□□ -2.2
COL6A5A8TX70 AC006483.1-201ENST00000487308 313 ntBASIC1.33□□□□□ -2.2
COL6A5A8TX70 RPS3AP22-201ENST00000488297 769 ntBASIC1.33□□□□□ -2.2
COL6A5A8TX70 TRAV31-201ENST00000502780 342 ntBASIC1.33□□□□□ -2.2
COL6A5A8TX70 GZMAP1-201ENST00000503054 631 ntBASIC1.33□□□□□ -2.2
COL6A5A8TX70 AC022447.3-201ENST00000506865 495 ntBASIC1.33□□□□□ -2.2
COL6A5A8TX70 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.33□□□□□ -2.2
COL6A5A8TX70 RN7SKP49-201ENST00000516675 260 ntBASIC1.33□□□□□ -2.2
COL6A5A8TX70 RNU6-826P-201ENST00000516827 104 ntBASIC1.33□□□□□ -2.2
COL6A5A8TX70 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.33□□□□□ -2.2
COL6A5A8TX70 AL356575.1-201ENST00000603008 283 ntBASIC1.33□□□□□ -2.2
COL6A5A8TX70 STMN1P1-201ENST00000617809 440 ntBASIC1.33□□□□□ -2.2
COL6A5A8TX70 AC008121.3-201ENST00000618726 433 ntBASIC1.33□□□□□ -2.2
COL6A5A8TX70 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
COL6A5A8TX70 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.33□□□□□ -2.2
COL6A5A8TX70 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
COL6A5A8TX70 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
COL6A5A8TX70 RNU1-93P-201ENST00000364704 169 ntBASIC1.32□□□□□ -2.2
COL6A5A8TX70 Y_RNA.324-201ENST00000365165 102 ntBASIC1.32□□□□□ -2.2
COL6A5A8TX70 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.32□□□□□ -2.2
COL6A5A8TX70 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.32□□□□□ -2.2
COL6A5A8TX70 AP002345.1-201ENST00000456493 928 ntBASIC1.32□□□□□ -2.2
COL6A5A8TX70 RPS15AP36-201ENST00000492022 382 ntBASIC1.32□□□□□ -2.2
COL6A5A8TX70 AIG1P1-201ENST00000503376 148 ntBASIC1.32□□□□□ -2.2
COL6A5A8TX70 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.32□□□□□ -2.2
COL6A5A8TX70 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.32□□□□□ -2.2
COL6A5A8TX70 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC1.32□□□□□ -2.2
COL6A5A8TX70 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.32□□□□□ -2.2
COL6A5A8TX70 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
COL6A5A8TX70 RNU6-53P-201ENST00000365367 106 ntBASIC1.32□□□□□ -2.2
COL6A5A8TX70 MIR517C-201ENST00000385103 95 ntBASIC1.32□□□□□ -2.2
COL6A5A8TX70 BTBD10P2-201ENST00000404779 676 ntBASIC1.32□□□□□ -2.2
COL6A5A8TX70 XKRYP4-201ENST00000414395 483 ntBASIC1.32□□□□□ -2.2
COL6A5A8TX70 PAICSP7-201ENST00000419829 962 ntBASIC1.32□□□□□ -2.2
COL6A5A8TX70 RPL27AP8-201ENST00000424277 446 ntBASIC1.32□□□□□ -2.2
COL6A5A8TX70 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.32□□□□□ -2.2
COL6A5A8TX70 XKRYP5-201ENST00000449659 483 ntBASIC1.32□□□□□ -2.2
COL6A5A8TX70 IFNWP4-201ENST00000453148 294 ntBASIC1.32□□□□□ -2.2
COL6A5A8TX70 AP000705.1-201ENST00000454567 350 ntBASIC1.32□□□□□ -2.2
COL6A5A8TX70 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.32□□□□□ -2.2
COL6A5A8TX70 AC079804.2-201ENST00000490376 200 ntBASIC1.32□□□□□ -2.2
COL6A5A8TX70 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.32□□□□□ -2.2
COL6A5A8TX70 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.32□□□□□ -2.2
COL6A5A8TX70 AC008126.1-201ENST00000549019 480 ntBASIC1.32□□□□□ -2.2
COL6A5A8TX70 AC034268.2-201ENST00000571784 482 ntBASIC1.32□□□□□ -2.2
COL6A5A8TX70 AC084373.1-201ENST00000603311 235 ntBASIC1.32□□□□□ -2.2
COL6A5A8TX70 XIST_intron.1-201ENST00000619444 68 ntBASIC1.32□□□□□ -2.2
COL6A5A8TX70 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
COL6A5A8TX70 HMGB1P5-201ENST00000255320 642 ntBASIC1.31□□□□□ -2.2
COL6A5A8TX70 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.31□□□□□ -2.2
COL6A5A8TX70 USP9YP8-201ENST00000441913 500 ntBASIC1.31□□□□□ -2.2
COL6A5A8TX70 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.31□□□□□ -2.2
COL6A5A8TX70 AC015720.1-201ENST00000565251 277 ntBASIC1.31□□□□□ -2.2
COL6A5A8TX70 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.31□□□□□ -2.2
COL6A5A8TX70 MIR502-201ENST00000606349 86 ntBASIC1.31□□□□□ -2.2
COL6A5A8TX70 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
COL6A5A8TX70 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.31□□□□□ -2.2
COL6A5A8TX70 RNA5SP363-201ENST00000365072 115 ntBASIC1.31□□□□□ -2.2
COL6A5A8TX70 RNU6-178P-201ENST00000384631 104 ntBASIC1.31□□□□□ -2.2
COL6A5A8TX70 SEC63P1-201ENST00000425785 1258 ntBASIC1.31□□□□□ -2.2
COL6A5A8TX70 RPS15AP1-201ENST00000457423 391 ntBASIC1.31□□□□□ -2.2
COL6A5A8TX70 AC096992.1-201ENST00000459808 709 ntBASIC1.31□□□□□ -2.2
COL6A5A8TX70 AC104472.2-201ENST00000469035 601 ntBASIC1.31□□□□□ -2.2
COL6A5A8TX70 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.31□□□□□ -2.2
COL6A5A8TX70 DUXAP5-201ENST00000529668 529 ntBASIC1.31□□□□□ -2.2
COL6A5A8TX70 AC092451.2-201ENST00000538746 658 ntBASIC1.31□□□□□ -2.2
COL6A5A8TX70 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.31□□□□□ -2.2
COL6A5A8TX70 AL109933.3-201ENST00000619095 188 ntBASIC1.31□□□□□ -2.2
COL6A5A8TX70 AC098657.3-201ENST00000620434 263 ntBASIC1.31□□□□□ -2.2
COL6A5A8TX70 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.31□□□□□ -2.2
COL6A5A8TX70 MTND4P12-201ENST00000498999 1377 ntBASIC1.31□□□□□ -2.2
COL6A5A8TX70 AC005336.3-201ENST00000623833 2679 ntBASIC1.3□□□□□ -2.2
COL6A5A8TX70 AC009812.4-201ENST00000569134 1805 ntBASIC1.3□□□□□ -2.2
COL6A5A8TX70 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.3□□□□□ -2.2
COL6A5A8TX70 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.3□□□□□ -2.2
COL6A5A8TX70 MUPP-201ENST00000438111 566 ntBASIC1.3□□□□□ -2.2
COL6A5A8TX70 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.3□□□□□ -2.2
COL6A5A8TX70 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.3□□□□□ -2.2
COL6A5A8TX70 AC009314.1-201ENST00000603871 304 ntBASIC1.3□□□□□ -2.2
COL6A5A8TX70 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.3□□□□□ -2.2
COL6A5A8TX70 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
COL6A5A8TX70 AC010680.1-201ENST00000590024 3590 ntBASIC1.3□□□□□ -2.2
COL6A5A8TX70 RNU6-60P-201ENST00000364792 103 ntBASIC1.3□□□□□ -2.2
COL6A5A8TX70 RNU6-716P-201ENST00000365621 103 ntBASIC1.3□□□□□ -2.2
COL6A5A8TX70 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.3□□□□□ -2.2
COL6A5A8TX70 RPS23P4-201ENST00000487908 423 ntBASIC1.3□□□□□ -2.2
COL6A5A8TX70 AC079203.1-201ENST00000487972 404 ntBASIC1.3□□□□□ -2.2
COL6A5A8TX70 RN7SL274P-201ENST00000492268 272 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms