Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 AL356968.1-201ENST00000416622 474 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 EI24P4-201ENST00000423683 1078 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 AL662874.1-201ENST00000426065 230 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 PRDX3P3-201ENST00000447765 522 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 RPS11P1-201ENST00000451072 473 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 HLA-DPA3-207ENST00000454398 229 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 SCARNA16.4-201ENST00000516956 187 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 SNORA43.3-201ENST00000517240 103 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 AC027308.1-201ENST00000517993 110 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 AC012400.1-201ENST00000518452 381 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 HSBP1P1-201ENST00000555205 166 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 AC084783.1-201ENST00000565846 910 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 AC005357.1-201ENST00000588399 301 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 AC008521.2-201ENST00000591021 259 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 AC005344.1-201ENST00000613391 459 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 AC005005.4-201ENST00000623789 16698 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHISA3A0PJX4 PCAT14-202ENST00000627127 3935 ntBASIC4.52□□□□□ -1.69
SHISA3A0PJX4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 RNU6-1303P-201ENST00000364841 107 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 RNU6-76P-201ENST00000384060 104 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 MIR323B-201ENST00000385269 82 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 MIR1252-201ENST00000408861 65 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 SYF2P2-201ENST00000417620 583 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 BX842559.1-201ENST00000419615 532 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 MRPS18CP6-201ENST00000423587 223 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 RPL7P2-201ENST00000427639 268 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 DAP3P1-201ENST00000441522 278 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 OSTCP8-201ENST00000445117 448 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 GAPDHP25-201ENST00000447061 1001 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 AL353752.1-201ENST00000454946 260 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 PCMTD1P1-201ENST00000455560 355 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 RN7SL72P-201ENST00000460697 269 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 AC011005.2-201ENST00000487324 359 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 ENPP7P9-201ENST00000514456 627 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 RNA5SP373-201ENST00000517271 95 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 AC008694.2-201ENST00000517591 306 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 AC131281.1-201ENST00000522984 164 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 AL161713.1-201ENST00000555538 145 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 RN7SL652P-201ENST00000577769 300 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 LRRC37A5P-203ENST00000580181 585 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 AC093227.2-201ENST00000589357 285 ntBASIC4.51□□□□□ -1.69
SHISA3A0PJX4 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHISA3A0PJX4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 SMG1P4-204ENST00000523028 4131 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
SHISA3A0PJX4 MIR375-201ENST00000362103 64 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 MIR133B-201ENST00000362210 119 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 Y_RNA.106-201ENST00000363189 100 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 Y_RNA.151-201ENST00000363566 112 ntBASIC4.5□□□□□ -1.69
SHISA3A0PJX4 Y_RNA.577-201ENST00000384794 101 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms