Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC245100.7-201ENST00000609678 442 ntBASIC1.8□□□□□ -2.12
TRAV4A0A0B4J268 MIR7106-201ENST00000612419 65 ntBASIC1.8□□□□□ -2.12
TRAV4A0A0B4J268 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.8□□□□□ -2.12
TRAV4A0A0B4J268 AL449363.1-201ENST00000617815 186 ntBASIC1.8□□□□□ -2.12
TRAV4A0A0B4J268 AL356585.4-201ENST00000623078 1229 ntBASIC1.8□□□□□ -2.12
TRAV4A0A0B4J268 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.8□□□□□ -2.12
TRAV4A0A0B4J268 AC080100.1-201ENST00000624239 5356 ntBASIC1.8□□□□□ -2.12
TRAV4A0A0B4J268 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV4A0A0B4J268 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 RNA5SP456-201ENST00000364002 114 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 SNORA6-201ENST00000384033 151 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 NPM1P10-201ENST00000398310 865 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 SEPT2P1-201ENST00000419651 180 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 AC007560.1-201ENST00000426912 237 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 ZNF965P-201ENST00000432501 817 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 AC024082.2-201ENST00000434771 238 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 PGBD4P3-201ENST00000440731 581 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 AL031659.1-201ENST00000447075 539 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 TRGVB-201ENST00000453257 471 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 Z82190.1-201ENST00000454534 490 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 AC015688.2-201ENST00000584523 262 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 RPL23AP92-201ENST00000603609 255 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 AC005000.2-201ENST00000605468 310 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 OR2AS2P-201ENST00000606902 342 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 AC103710.4-201ENST00000609301 899 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 MIR6840-201ENST00000611937 71 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 OR5H6-203ENST00000642105 978 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 MTND4P35-201ENST00000604257 1375 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 AC131280.1-202ENST00000624067 4211 ntBASIC1.79□□□□□ -2.12
TRAV4A0A0B4J268 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 SNORD115-48-201ENST00000364764 76 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 RN7SKP226-201ENST00000364912 300 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 SNORA41-201ENST00000384675 132 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 MIR483-201ENST00000385070 76 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 MIR27B-201ENST00000385129 97 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 MIR34A-201ENST00000385130 110 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AL024474.1-201ENST00000404655 591 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 SNORA11.1-201ENST00000408133 129 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AL009174.1-201ENST00000426577 416 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 RPL23AP83-201ENST00000434984 473 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AC009237.8-201ENST00000445492 379 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 RPL23AP23-201ENST00000452590 471 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 RPL23AP45-201ENST00000476406 468 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AC093663.2-201ENST00000484625 313 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AC025918.2-201ENST00000558683 763 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AC095057.3-201ENST00000567102 1157 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AGGF1P5-201ENST00000567900 919 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 RPL23AP84-201ENST00000571193 464 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AC007336.1-201ENST00000576365 3828 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AC105224.1-201ENST00000587055 421 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 VN1R90P-201ENST00000595717 726 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AC135507.1-201ENST00000607214 561 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AC090772.4-201ENST00000623599 362 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AC012640.5-201ENST00000623897 319 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 AC010872.1-201ENST00000624225 675 ntBASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
TRAV4A0A0B4J268 ZNF658B-202ENST00000615961 3375 ntBASIC1.77□□□□□ -2.13
TRAV4A0A0B4J268 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV4A0A0B4J268 GDI2P1-201ENST00000429312 1336 ntBASIC1.77□□□□□ -2.13
TRAV4A0A0B4J268 HMGB1P5-201ENST00000255320 642 ntBASIC1.77□□□□□ -2.13
TRAV4A0A0B4J268 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV4A0A0B4J268 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRAV4A0A0B4J268 SNORD114-30-201ENST00000364448 72 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms