Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.7□□□□□ -2.14
HLA-DRB4X5D2U9 AC025588.3-201ENST00000604182 274 ntBASIC1.7□□□□□ -2.14
HLA-DRB4X5D2U9 AC009090.3-201ENST00000616553 565 ntBASIC1.7□□□□□ -2.14
HLA-DRB4X5D2U9 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
HLA-DRB4X5D2U9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.7□□□□□ -2.14
HLA-DRB4X5D2U9 AC027309.3-201ENST00000623419 351 ntBASIC1.7□□□□□ -2.14
HLA-DRB4X5D2U9 AC012640.5-201ENST00000623897 319 ntBASIC1.7□□□□□ -2.14
HLA-DRB4X5D2U9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
HLA-DRB4X5D2U9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HLA-DRB4X5D2U9 MTND4P35-201ENST00000604257 1375 ntBASIC1.7□□□□□ -2.14
HLA-DRB4X5D2U9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.7□□□□□ -2.14
HLA-DRB4X5D2U9 AC046144.1-201ENST00000478559 1853 ntBASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 AL022578.1-201ENST00000439330 1433 ntBASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 HMGB1P5-201ENST00000255320 642 ntBASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 RPL17P50-201ENST00000396131 546 ntBASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 AL591416.1-201ENST00000404015 867 ntBASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 RNU4-74P-201ENST00000411280 161 ntBASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 RPL7L1P10-201ENST00000427790 463 ntBASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 MRPL35P4-201ENST00000453682 566 ntBASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 BX248409.1-201ENST00000455497 255 ntBASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 HSPE1P6-201ENST00000479457 291 ntBASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 GZMAP1-201ENST00000503054 631 ntBASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 MTCYBP20-201ENST00000524239 1129 ntBASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 AGGF1P5-201ENST00000567900 919 ntBASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 AF131215.7-201ENST00000602443 707 ntBASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 AC090116.1-201ENST00000615679 446 ntBASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
HLA-DRB4X5D2U9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 RNU6-670P-201ENST00000364312 104 ntBASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 SNORA67.4-201ENST00000384688 142 ntBASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 UBE2V1P2-201ENST00000397758 440 ntBASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 U3.40-201ENST00000408706 208 ntBASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 TATDN1P1-201ENST00000414123 891 ntBASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 SNORA31.18-201ENST00000517043 134 ntBASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 AP003122.3-201ENST00000526316 255 ntBASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 AC023824.2-201ENST00000566185 400 ntBASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 AC002984.1-201ENST00000591692 448 ntBASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 DNAJC19P3-201ENST00000594491 331 ntBASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 APOOP1-201ENST00000604695 592 ntBASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 BNIP3P19-201ENST00000605397 577 ntBASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 AC013562.2-201ENST00000611632 603 ntBASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 AL031601.2-202ENST00000622650 282 ntBASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 AL137003.2-201ENST00000606924 2538 ntBASIC1.68□□□□□ -2.14
HLA-DRB4X5D2U9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 AC097714.1-201ENST00000511272 1647 ntBASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 RNA5SP289-201ENST00000362332 137 ntBASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 SNORA38-201ENST00000363946 132 ntBASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 SNORA3A-201ENST00000364113 130 ntBASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 MIR767-201ENST00000390228 109 ntBASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 U3.20-201ENST00000390909 217 ntBASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 AP002784.2-201ENST00000397300 549 ntBASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 CYCSP45-201ENST00000402289 315 ntBASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 AC004865.1-201ENST00000442276 1003 ntBASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 HIGD1AP2-201ENST00000446367 280 ntBASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 WASF1P1-201ENST00000447560 1131 ntBASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 RNU6-717P-201ENST00000459076 104 ntBASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 KLRA1P-201ENST00000503499 986 ntBASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 RNA5SP281-201ENST00000516504 135 ntBASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 OR11H5P-201ENST00000554039 926 ntBASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 AC090312.2-201ENST00000582687 378 ntBASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 SNORD14A-201ENST00000606526 91 ntBASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 AP005137.2-201ENST00000609238 400 ntBASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 AC005332.10-201ENST00000612725 619 ntBASIC1.67□□□□□ -2.14
HLA-DRB4X5D2U9 AC079395.3-201ENST00000615161 484 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms