Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AC096576.1-201ENST00000489014 359 ntBASIC2.44□□□□□ -2.02
USH1CQ9Y6N9 NAMPTP2-201ENST00000505629 1115 ntBASIC2.44□□□□□ -2.02
USH1CQ9Y6N9 AC069306.1-201ENST00000507006 843 ntBASIC2.44□□□□□ -2.02
USH1CQ9Y6N9 RNU6-1102P-201ENST00000516149 96 ntBASIC2.44□□□□□ -2.02
USH1CQ9Y6N9 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.44□□□□□ -2.02
USH1CQ9Y6N9 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.44□□□□□ -2.02
USH1CQ9Y6N9 MTCO1P40-201ENST00000574371 625 ntBASIC2.44□□□□□ -2.02
USH1CQ9Y6N9 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.44□□□□□ -2.02
USH1CQ9Y6N9 AC100814.1-201ENST00000606963 623 ntBASIC2.44□□□□□ -2.02
USH1CQ9Y6N9 AP002826.1-201ENST00000608835 315 ntBASIC2.44□□□□□ -2.02
USH1CQ9Y6N9 AC103798.2-201ENST00000624292 632 ntBASIC2.44□□□□□ -2.02
USH1CQ9Y6N9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
USH1CQ9Y6N9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
USH1CQ9Y6N9 GDI2P1-201ENST00000429312 1336 ntBASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 AC093536.2-201ENST00000565257 1406 ntBASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 SNORD62.1-201ENST00000362541 86 ntBASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 RNU6-582P-201ENST00000362989 107 ntBASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 RNU1-51P-201ENST00000365345 176 ntBASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 Y_RNA.510-201ENST00000384511 114 ntBASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 AC016769.3-201ENST00000396562 315 ntBASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 TMSB4XP8-201ENST00000402089 135 ntBASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 SNORA11.2-201ENST00000408318 127 ntBASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 RNU2-15P-201ENST00000410692 191 ntBASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 TMSB4XP6-201ENST00000415187 135 ntBASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 RPL7P30-201ENST00000420888 709 ntBASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 TMSB4XP1-201ENST00000424567 135 ntBASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 RPL7P37-201ENST00000425095 738 ntBASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 NDUFB4P6-201ENST00000436819 366 ntBASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 RNU6-885P-201ENST00000516607 104 ntBASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 RNU1-104P-201ENST00000517280 175 ntBASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 OR4R2P-201ENST00000530815 597 ntBASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 AL161734.1-201ENST00000609720 557 ntBASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
USH1CQ9Y6N9 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 PABPC1P9-201ENST00000426076 1612 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 MIR16-2-201ENST00000362117 81 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 RNU6-251P-201ENST00000363235 104 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 RNU6-792P-201ENST00000363490 107 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 Y_RNA.500-201ENST00000384466 111 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 SNORD116-23-201ENST00000384645 92 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 MTCO2P31-201ENST00000402702 684 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 AL355615.1-201ENST00000406187 641 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 AL356320.2-201ENST00000417263 507 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 MORF4L1P6-201ENST00000418771 268 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 AC092573.2-201ENST00000434546 243 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 AL050341.1-201ENST00000447743 313 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 AC118282.2-201ENST00000508739 374 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 AC008716.1-201ENST00000511084 513 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 IGLV3-17-201ENST00000519099 244 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 MIR4513-201ENST00000581077 86 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 MIR3609-201ENST00000582661 80 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 AC079089.3-201ENST00000603094 673 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 MIR6895-201ENST00000613497 78 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 AC027309.3-201ENST00000623419 351 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 AC135776.4-201ENST00000624300 1904 ntBASIC2.42□□□□□ -2.02
USH1CQ9Y6N9 RNU6-1155P-201ENST00000363554 107 ntBASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 SNORA5B-201ENST00000363786 132 ntBASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 RNA5SP37-201ENST00000365420 130 ntBASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 AC236972.1-201ENST00000433225 199 ntBASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 MTCO3P43-201ENST00000440974 771 ntBASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 RPS24P13-201ENST00000442520 397 ntBASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 AC025750.2-201ENST00000442609 450 ntBASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 RAC1P7-201ENST00000445367 377 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms