Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
TRAPPC1Q9Y5R8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 OR5BR1P-201ENST00000524992 1330 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 RNU6-28P-201ENST00000362378 107 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 RNU5E-8P-201ENST00000363502 116 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 PPIAP31-201ENST00000405422 495 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 PPP1R11P2-201ENST00000423543 382 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 RPS20P5-201ENST00000434808 360 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 TAAR7P-201ENST00000436141 242 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 SDCBPP1-201ENST00000440192 890 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 CDC27P1-201ENST00000445384 715 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 Z96811.1-201ENST00000445880 108 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AC092155.2-201ENST00000454675 477 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AC108734.3-201ENST00000481241 1165 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AC135721.1-201ENST00000497954 479 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AC006499.2-201ENST00000513470 337 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AC022483.1-201ENST00000514020 567 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 RNU6-1256P-201ENST00000516539 103 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AC007336.1-201ENST00000576365 3828 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 MIR3921-201ENST00000577308 85 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 MIR4284-201ENST00000578924 81 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 MIR5194-201ENST00000582634 120 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AC020895.1-201ENST00000595362 272 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AL390838.2-201ENST00000602394 274 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AC068313.1-201ENST00000604028 1008 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AC112220.2-201ENST00000605513 533 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AC123767.1-202ENST00000620407 817 ntBASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.96□□□□□ -2.1
TRAPPC1Q9Y5R8 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 RNU5A-1-201ENST00000362698 116 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 Y_RNA.234-201ENST00000364409 97 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 MIR514A1-201ENST00000385133 98 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AC025750.1-201ENST00000399891 379 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AL162578.1-201ENST00000406202 378 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 RNA5SP80-201ENST00000410475 111 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AC018630.2-202ENST00000422992 927 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 RPF2P1-201ENST00000424137 906 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AC234781.2-201ENST00000426370 994 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AL714022.1-201ENST00000439897 151 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AC009296.1-201ENST00000443146 155 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 DDX3P2-201ENST00000446138 111 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AL031659.1-201ENST00000447075 539 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 RN7SL610P-201ENST00000463845 291 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AC133134.1-201ENST00000466800 359 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 RPL31P50-201ENST00000471002 296 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AC116337.2-201ENST00000477662 156 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 HMGB1P36-201ENST00000487709 576 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AC104629.1-201ENST00000494226 508 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 RPL30P5-201ENST00000494923 336 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AC231760.1-201ENST00000498002 260 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AC117522.3-201ENST00000507974 584 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 SNORA74D-201ENST00000516404 141 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 CKS1BP7-201ENST00000522230 235 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 OR5B10P-201ENST00000532869 642 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AC011611.1-201ENST00000552179 197 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AMZ2P1-203ENST00000565833 850 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 AC009163.5-201ENST00000575421 637 ntBASIC1.95□□□□□ -2.1
TRAPPC1Q9Y5R8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms