Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 TRAV8-5-201ENST00000537369 341 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 MTND6P33-201ENST00000571794 183 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 AC113403.1-201ENST00000604910 193 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 AC099654.10-201ENST00000640395 161 ntBASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHB1Q9Y5F3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 SNORA72.1-201ENST00000363485 129 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 RNU6-511P-201ENST00000363496 107 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 RNA5SP283-201ENST00000365604 119 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 AC097374.1-203ENST00000400783 485 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 RN7SKP159-201ENST00000410657 292 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 JKAMPP1-201ENST00000413804 919 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 MTCO3P12-201ENST00000416718 547 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 AL139095.3-201ENST00000419672 1203 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 AL139413.1-201ENST00000421309 217 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 MED13P1-201ENST00000428342 171 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 MTND3P23-201ENST00000431980 347 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 RPL23AP30-201ENST00000432419 501 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 AC005094.1-201ENST00000440420 368 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 BNIP3P2-201ENST00000441221 577 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 AC006480.1-201ENST00000449887 378 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 MTND3P10-201ENST00000450967 341 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 AC092001.1-201ENST00000453012 261 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 RNU6-261P-201ENST00000459506 102 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 PPBPP1-201ENST00000510807 373 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 RNU6-64P-201ENST00000517119 105 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 AC100870.1-201ENST00000522035 505 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 AL034351.1-201ENST00000605288 668 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 AC006133.1-201ENST00000617106 264 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 AC243312.2-201ENST00000623340 601 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 FER-210ENST00000628534 558 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 AC140479.6-201ENST00000633535 357 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 ZNF680P1-201ENST00000436625 1469 ntBASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDHB1Q9Y5F3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 MIR331-201ENST00000362302 94 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 U3.15-201ENST00000365398 212 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 RNU6-74P-201ENST00000384235 107 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 SNORD3H-201ENST00000384486 214 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 RNU6-606P-201ENST00000384721 111 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 PPIAP31-201ENST00000405422 495 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 RNU2-43P-201ENST00000410306 190 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 UBE2FP1-201ENST00000416536 447 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 SNRPEP10-201ENST00000420249 274 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 AC244098.2-201ENST00000422068 99 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 ZNF863P-201ENST00000426746 417 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 OR2AS1P-201ENST00000427827 319 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 SEPT14P3-201ENST00000439401 183 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 AL732372.2-207ENST00000445840 183 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 FDX1P2-201ENST00000450769 375 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 SEPT14P2-201ENST00000453405 183 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 SNORD97-201ENST00000459187 142 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 RN7SL542P-201ENST00000467147 294 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 RPS27AP1-201ENST00000475545 471 ntBASIC4.28□□□□□ -1.72
PCDHB1Q9Y5F3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms