Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 AL133153.1-201ENST00000557756 303 ntBASIC4.72□□□□□ -1.65
PCDHB4Q9Y5E5 AC020661.2-201ENST00000560114 134 ntBASIC4.72□□□□□ -1.65
PCDHB4Q9Y5E5 AC007566.2-201ENST00000603642 413 ntBASIC4.72□□□□□ -1.65
PCDHB4Q9Y5E5 AL451044.1-201ENST00000604867 238 ntBASIC4.72□□□□□ -1.65
PCDHB4Q9Y5E5 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHB4Q9Y5E5 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.72□□□□□ -1.65
PCDHB4Q9Y5E5 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHB4Q9Y5E5 AC007529.1-201ENST00000418574 2178 ntBASIC4.72□□□□□ -1.65
PCDHB4Q9Y5E5 AL445437.1-201ENST00000623157 3087 ntBASIC4.72□□□□□ -1.65
PCDHB4Q9Y5E5 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB4Q9Y5E5 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHB4Q9Y5E5 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PCDHB4Q9Y5E5 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHB4Q9Y5E5 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.72□□□□□ -1.65
PCDHB4Q9Y5E5 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
PCDHB4Q9Y5E5 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PCDHB4Q9Y5E5 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AP004289.2-201ENST00000444413 1457 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AC025031.4-201ENST00000621248 3271 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AL139276.1-201ENST00000311910 1001 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AC073343.1-201ENST00000328239 651 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 RNU6-522P-201ENST00000364497 107 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 RNA5SP22-201ENST00000365393 109 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 MIR3065-201ENST00000390137 79 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AL606923.1-201ENST00000406616 190 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 SNORA74C-2-201ENST00000411179 201 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 RPL37P18-201ENST00000411602 243 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AC133473.1-201ENST00000455173 299 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AC010683.1-201ENST00000473673 378 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AC087385.1-201ENST00000475062 312 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 FAM206BP-201ENST00000510179 541 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 MTCO3P44-201ENST00000510977 541 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AC017037.2-201ENST00000513850 890 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 RNU6-27P-201ENST00000516146 107 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AC093249.1-201ENST00000567049 203 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AL138721.1-201ENST00000616756 179 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AP000346.3-201ENST00000622821 210 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AP000843.1-201ENST00000624880 701 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 AC091925.2-201ENST00000625059 256 ntBASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
PCDHB4Q9Y5E5 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 AC018529.3-201ENST00000624212 2254 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 Y_RNA.315-201ENST00000365117 102 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 RNU6-1029P-201ENST00000384109 107 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 RNU6-278P-201ENST00000390945 109 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 RNU2-39P-201ENST00000410604 198 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 RPL26P29-201ENST00000415623 438 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 AL139095.3-201ENST00000419672 1203 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 AL356387.2-201ENST00000422272 243 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 RPL7L1P10-201ENST00000427790 463 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 BRK1P2-201ENST00000442875 223 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 GEMIN8P3-201ENST00000445417 720 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 AL118520.1-201ENST00000450770 291 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 AL162388.1-201ENST00000450912 352 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 MTND1P9-201ENST00000453775 944 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 DHFRP3-201ENST00000455595 559 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 RN7SL738P-201ENST00000470264 297 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 AC021146.3-201ENST00000511911 260 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 RNU6-1045P-201ENST00000516321 107 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 RNU2-10P-201ENST00000516375 211 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 MYL12AP1-201ENST00000518490 515 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 TRMT10BP1-201ENST00000519377 943 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 AL133271.1-201ENST00000538229 291 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 NCAPGP2-201ENST00000557911 754 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 RPL23AP97-201ENST00000568955 471 ntBASIC4.7□□□□□ -1.66
PCDHB4Q9Y5E5 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms