Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 RPS27AP18-201ENST00000515536 459 ntBASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 RANP9-201ENST00000519957 271 ntBASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 PTP4A1P6-201ENST00000531034 478 ntBASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 MIR5583-1-201ENST00000580941 59 ntBASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 AC104662.1-201ENST00000604448 511 ntBASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 UBE2V1P2-201ENST00000397758 440 ntBASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 COX5BP7-201ENST00000414780 274 ntBASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 SKA2P1-201ENST00000425592 390 ntBASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 CBX3P6-201ENST00000430257 527 ntBASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 RPL36AP6-201ENST00000435770 321 ntBASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 TDGF1P1-201ENST00000445734 527 ntBASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 MIR2053-201ENST00000459295 91 ntBASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 AC022034.3-201ENST00000471393 478 ntBASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 MTND4LP22-201ENST00000508209 276 ntBASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 AC006130.2-201ENST00000586202 326 ntBASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 AC012409.4-201ENST00000612923 249 ntBASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 AC025034.2-201ENST00000623264 286 ntBASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 AL049641.1-201ENST00000441055 1948 ntBASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 AC004817.4-201ENST00000602396 3625 ntBASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RTCBQ9Y3I0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 AL022311.1-201ENST00000623726 19416 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 Y_RNA.5-201ENST00000362334 102 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 RNU6-1032P-201ENST00000384100 107 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 EIF4E2P1-201ENST00000393781 255 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 MRPL42P3-201ENST00000401492 326 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 AL136372.1-201ENST00000403060 228 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 POLHP1-201ENST00000411806 470 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 AC079809.1-201ENST00000415468 276 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 AC009302.1-201ENST00000417147 390 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 RPL12P18-201ENST00000437175 325 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 MTND1P17-201ENST00000448961 204 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 snoU13.7-201ENST00000459220 104 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 MTATP8P1-201ENST00000467115 207 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 RN7SL809P-201ENST00000482040 297 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 RNU6-764P-201ENST00000516396 105 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 RPL23AP53-201ENST00000521854 457 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 AP000859.1-201ENST00000525536 307 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 AC023043.2-201ENST00000589678 1026 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 AC092747.3-201ENST00000603769 301 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 AC098657.3-201ENST00000620434 263 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 AC008013.2-202ENST00000637965 364 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 MFSD8-242ENST00000641690 4199 ntBASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RTCBQ9Y3I0 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RTCBQ9Y3I0 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms