Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 RPS25P9-201ENST00000435591 252 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AC122718.1-201ENST00000439448 744 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 MEMO1P3-201ENST00000459811 302 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 NDUFA5P9-201ENST00000472609 340 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AL135752.1-201ENST00000479477 471 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AL049874.1-201ENST00000489560 388 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 CEACAMP10-202ENST00000495431 496 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AC119751.4-201ENST00000507498 357 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AC104619.4-201ENST00000510773 249 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AC024589.1-201ENST00000512207 263 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 TTC39CP1-201ENST00000512513 755 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AC124947.2-202ENST00000552735 133 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 HMGB1P6-201ENST00000569046 646 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 RNU4-5P-201ENST00000607255 135 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AL603758.1-201ENST00000618654 241 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AC079228.1-201ENST00000624774 1049 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 AC244258.1-201ENST00000637553 1071 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 OR5H6-203ENST00000642105 978 ntBASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.56□□□□□ -2
KCNIP3Q9Y2W7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 SNORD15B-201ENST00000384714 146 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 MIR218-2-201ENST00000385006 110 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 MIR1289-1-201ENST00000408836 144 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 AC092648.1-201ENST00000425870 423 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 SNRPEP7-201ENST00000438350 220 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 LSM1P1-201ENST00000438629 273 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 RPL21P23-201ENST00000446654 460 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 AL109741.2-201ENST00000455561 343 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 AC106707.2-201ENST00000484182 374 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 HMGB1P36-201ENST00000487709 576 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 AC147055.4-201ENST00000504399 745 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 SEM1P1-201ENST00000506694 209 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 RNU6-1256P-201ENST00000516539 103 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 MIR2682-201ENST00000580305 110 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 AC083760.1-201ENST00000589621 670 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 AC079089.3-201ENST00000603094 673 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 AP000787.2-201ENST00000604432 568 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 AL590392.1-201ENST00000604960 446 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 AL139022.2-201ENST00000606934 443 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 AC010608.3-201ENST00000625048 527 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 AC009093.8-201ENST00000641769 292 ntBASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.55□□□□□ -2
KCNIP3Q9Y2W7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 RNU6-270P-201ENST00000364131 105 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 RNA5SP139-201ENST00000364340 117 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 RNU6-637P-201ENST00000384050 107 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 TAF9BP1-201ENST00000396646 746 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 AL356421.1-201ENST00000403255 413 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 RPL7P25-201ENST00000404151 721 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 USP9YP33-201ENST00000412220 421 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 SPA17P1-201ENST00000416656 452 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 AL645937.1-202ENST00000421799 937 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 HMGN2P30-201ENST00000423237 256 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 NANOGP5-201ENST00000424456 877 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 HSFY7P-201ENST00000432672 318 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 USP9YP35-201ENST00000435696 412 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 HSFY8P-201ENST00000437934 318 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 AC091862.1-201ENST00000438016 1100 ntBASIC2.54□□□□□ -2
KCNIP3Q9Y2W7 EEF1E1P1-201ENST00000446998 430 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms