Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC104307.1-201ENST00000616142 196 ntBASIC2.56□□□□□ -2
SHANK2Q9UPX8 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SHANK2Q9UPX8 AC095038.3-201ENST00000634439 195 ntBASIC2.56□□□□□ -2
SHANK2Q9UPX8 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.56□□□□□ -2
SHANK2Q9UPX8 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.56□□□□□ -2
SHANK2Q9UPX8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.55□□□□□ -2
SHANK2Q9UPX8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SHANK2Q9UPX8 RPS3AP9-201ENST00000417027 792 ntBASIC2.55□□□□□ -2
SHANK2Q9UPX8 TOMM22P1-201ENST00000418578 312 ntBASIC2.55□□□□□ -2
SHANK2Q9UPX8 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SHANK2Q9UPX8 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.55□□□□□ -2
SHANK2Q9UPX8 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.55□□□□□ -2
SHANK2Q9UPX8 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.55□□□□□ -2
SHANK2Q9UPX8 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.55□□□□□ -2
SHANK2Q9UPX8 DUXAP9-208ENST00000622815 614 ntBASIC2.55□□□□□ -2
SHANK2Q9UPX8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.55□□□□□ -2
SHANK2Q9UPX8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SHANK2Q9UPX8 RNA5SP167-201ENST00000365461 116 ntBASIC2.54□□□□□ -2
SHANK2Q9UPX8 RNU1-109P-201ENST00000383960 147 ntBASIC2.54□□□□□ -2
SHANK2Q9UPX8 MIR124-3-201ENST00000384866 87 ntBASIC2.54□□□□□ -2
SHANK2Q9UPX8 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.54□□□□□ -2
SHANK2Q9UPX8 RPL7P37-201ENST00000425095 738 ntBASIC2.54□□□□□ -2
SHANK2Q9UPX8 AL031659.1-201ENST00000447075 539 ntBASIC2.54□□□□□ -2
SHANK2Q9UPX8 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.54□□□□□ -2
SHANK2Q9UPX8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.54□□□□□ -2
SHANK2Q9UPX8 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.54□□□□□ -2
SHANK2Q9UPX8 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.54□□□□□ -2
SHANK2Q9UPX8 AL163153.1-201ENST00000554223 283 ntBASIC2.54□□□□□ -2
SHANK2Q9UPX8 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.54□□□□□ -2
SHANK2Q9UPX8 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.54□□□□□ -2
SHANK2Q9UPX8 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.54□□□□□ -2
SHANK2Q9UPX8 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.54□□□□□ -2
SHANK2Q9UPX8 AC011468.4-201ENST00000603942 409 ntBASIC2.54□□□□□ -2
SHANK2Q9UPX8 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.54□□□□□ -2
SHANK2Q9UPX8 AC093536.2-201ENST00000565257 1406 ntBASIC2.54□□□□□ -2
SHANK2Q9UPX8 U3.15-201ENST00000365398 212 ntBASIC2.53□□□□□ -2
SHANK2Q9UPX8 Y_RNA.354-201ENST00000365448 111 ntBASIC2.53□□□□□ -2
SHANK2Q9UPX8 AL645568.3-201ENST00000433683 316 ntBASIC2.53□□□□□ -2
SHANK2Q9UPX8 MTND2P2-201ENST00000434633 945 ntBASIC2.53□□□□□ -2
SHANK2Q9UPX8 RPS15AP7-201ENST00000439294 405 ntBASIC2.53□□□□□ -2
SHANK2Q9UPX8 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.53□□□□□ -2
SHANK2Q9UPX8 AC007395.1-201ENST00000451333 677 ntBASIC2.53□□□□□ -2
SHANK2Q9UPX8 AC104308.1-201ENST00000454621 333 ntBASIC2.53□□□□□ -2
SHANK2Q9UPX8 AC005912.1-201ENST00000495392 255 ntBASIC2.53□□□□□ -2
SHANK2Q9UPX8 RNA5SP220-201ENST00000516298 104 ntBASIC2.53□□□□□ -2
SHANK2Q9UPX8 PTP4A1P6-201ENST00000531034 478 ntBASIC2.53□□□□□ -2
SHANK2Q9UPX8 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.53□□□□□ -2
SHANK2Q9UPX8 AL049838.1-201ENST00000563647 981 ntBASIC2.53□□□□□ -2
SHANK2Q9UPX8 AC098848.2-201ENST00000588023 330 ntBASIC2.53□□□□□ -2
SHANK2Q9UPX8 VN1R84P-201ENST00000593697 235 ntBASIC2.53□□□□□ -2
SHANK2Q9UPX8 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.53□□□□□ -2
SHANK2Q9UPX8 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
SHANK2Q9UPX8 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SHANK2Q9UPX8 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 RPL23AP55-201ENST00000498163 452 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 MTCYBP17-201ENST00000503579 789 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 ATP5EP1-201ENST00000510257 156 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 AC104581.2-201ENST00000572227 430 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 KATNBL1P1-201ENST00000605192 748 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 MIR502-201ENST00000606349 86 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 AC024560.3-201ENST00000608482 349 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 AC092159.4-201ENST00000624944 550 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 Z98749.2-208ENST00000381646 500 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 HSPE1P26-201ENST00000405341 275 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 RPL21P134-201ENST00000453468 483 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 AC092155.2-201ENST00000454675 477 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 LDHBP3-201ENST00000514909 822 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 SMARCE1P4-201ENST00000523647 241 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 MIR4419B-201ENST00000577260 68 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 MTND2P13-201ENST00000577438 1039 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 AC006270.2-201ENST00000578523 652 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 AP001029.3-201ENST00000588063 596 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 YWHAQP7-201ENST00000603536 658 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 AC007620.3-201ENST00000608131 497 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 MIR6734-201ENST00000621166 68 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 AC012150.2-201ENST00000621300 544 ntBASIC2.52□□□□□ -2.01
SHANK2Q9UPX8 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SHANK2Q9UPX8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SHANK2Q9UPX8 SNORD48-201ENST00000364953 64 ntBASIC2.51□□□□□ -2.01
SHANK2Q9UPX8 AL121972.1-201ENST00000402023 252 ntBASIC2.51□□□□□ -2.01
SHANK2Q9UPX8 HMGB3P2-201ENST00000411913 584 ntBASIC2.51□□□□□ -2.01
SHANK2Q9UPX8 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.51□□□□□ -2.01
SHANK2Q9UPX8 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SHANK2Q9UPX8 BX510359.4-201ENST00000423750 193 ntBASIC2.51□□□□□ -2.01
SHANK2Q9UPX8 OR7L1P-201ENST00000456181 380 ntBASIC2.51□□□□□ -2.01
SHANK2Q9UPX8 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.51□□□□□ -2.01
SHANK2Q9UPX8 RNA5SP82-201ENST00000516707 92 ntBASIC2.51□□□□□ -2.01
SHANK2Q9UPX8 RN7SKP5-201ENST00000517045 272 ntBASIC2.51□□□□□ -2.01
SHANK2Q9UPX8 MIR4458-201ENST00000578872 75 ntBASIC2.51□□□□□ -2.01
SHANK2Q9UPX8 AL078603.1-201ENST00000603824 313 ntBASIC2.51□□□□□ -2.01
SHANK2Q9UPX8 AL645939.4-201ENST00000604495 135 ntBASIC2.51□□□□□ -2.01
SHANK2Q9UPX8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.51□□□□□ -2.01
SHANK2Q9UPX8 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms