Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC243428.1-201ENST00000421099 264 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 AC097713.2-201ENST00000430199 356 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 RPS15AP10-201ENST00000432472 382 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 AC138761.5-201ENST00000433967 325 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 AC093414.1-201ENST00000434712 514 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 AC099799.1-201ENST00000439809 192 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 RN7SL319P-201ENST00000480656 221 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 RNU6-408P-201ENST00000515910 100 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 RNU2-69P-201ENST00000516061 100 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 AC022616.4-201ENST00000522985 181 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 AC005899.2-201ENST00000584353 90 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 AC006254.3-201ENST00000603353 884 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 AC105254.2-201ENST00000603636 436 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 AC008814.1-201ENST00000603797 406 ntBASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ZC3H4Q9UPT8 AC009951.1-201ENST00000623674 2614 ntBASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 RNU6-214P-201ENST00000384130 107 ntBASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 RPL30P3-201ENST00000424262 333 ntBASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 HMGB1P9-201ENST00000429856 646 ntBASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 SNORD5.1-201ENST00000458800 75 ntBASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 RPL9P32-201ENST00000464118 620 ntBASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 OARD1-209ENST00000471367 401 ntTSL 2 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 AC016065.2-201ENST00000514530 444 ntBASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 AL021879.1-201ENST00000611756 288 ntBASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 AP005435.3-201ENST00000531260 3198 ntBASIC6.23□□□□□ -1.41
ZC3H4Q9UPT8 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 AL592437.2-201ENST00000421655 2434 ntBASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 AL049555.1-201ENST00000562834 1933 ntBASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 Y_RNA.350-201ENST00000365409 98 ntBASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 RNU6-701P-201ENST00000384059 107 ntBASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 SNORA70F-201ENST00000384142 135 ntBASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 SNORD56.6-201ENST00000384569 71 ntBASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 RNU6-55P-201ENST00000411092 107 ntBASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 AL138785.1-201ENST00000425821 331 ntBASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 AC234775.1-201ENST00000454247 670 ntBASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 AC112492.4-201ENST00000456549 352 ntBASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 AC087884.1-201ENST00000469738 328 ntBASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 AC006427.1-201ENST00000514359 712 ntBASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 Y_RNA.680-201ENST00000516441 93 ntBASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 HNRNPCP4-201ENST00000571636 900 ntBASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ZC3H4Q9UPT8 AL161637.1-201ENST00000622380 412 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms