Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 KCTD9P3-201ENST00000434597 1169 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 AC007967.1-201ENST00000455422 1159 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 RNU7-66P-201ENST00000459469 62 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 TRMT10BP1-201ENST00000519377 943 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 AP003385.6-201ENST00000531603 374 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 MIR5583-1-201ENST00000580941 59 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 AC020910.3-201ENST00000603701 874 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 AC090510.2-201ENST00000617465 629 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 AC068870.2-201ENST00000620635 389 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 AC019206.1-201ENST00000621938 425 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 AC008725.1-201ENST00000605123 2263 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 AC008079.2-201ENST00000623543 20396 ntBASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
BRPF3Q9ULD4 AC099654.2-201ENST00000433031 1980 ntBASIC5.71□□□□□ -1.49
BRPF3Q9ULD4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
BRPF3Q9ULD4 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 AL442639.1-201ENST00000625030 1899 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 RNU1-108P-201ENST00000362556 161 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 RNU6-43P-201ENST00000384302 107 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 Y_RNA.576-201ENST00000384781 102 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 MIR105-2-201ENST00000385083 81 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 MIR548P-201ENST00000408336 84 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 ELOCP18-201ENST00000434209 337 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 GTF2IP13-201ENST00000438487 386 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 CEACAMP7-201ENST00000444105 496 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 AL590399.6-201ENST00000446396 307 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 CCDC34P1-201ENST00000507441 517 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 AL137161.1-201ENST00000532231 390 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 AC093249.4-201ENST00000564755 259 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 MTND6P33-201ENST00000571794 183 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 BNIP3P25-201ENST00000596023 559 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 AP001330.4-201ENST00000604350 154 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 AL592436.1-201ENST00000605135 558 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 U73479.1-201ENST00000618062 168 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 AC087385.3-201ENST00000620477 187 ntBASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.71□□□□□ -1.5
BRPF3Q9ULD4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 SCN1A-220ENST00000641603 12506 ntBASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 RNU6-1287P-201ENST00000362914 107 ntBASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 Y_RNA.128-201ENST00000363391 112 ntBASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 RNU6-1060P-201ENST00000384664 107 ntBASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 AL592114.1-201ENST00000403842 483 ntBASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 RPS4XP9-201ENST00000405151 780 ntBASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 AC092447.6-201ENST00000414578 210 ntBASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 BEND7P1-201ENST00000422058 457 ntBASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 AL391219.1-201ENST00000422570 483 ntBASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 AC005517.2-201ENST00000424673 553 ntBASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 AC093106.2-201ENST00000428212 385 ntBASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 RPL23AP33-201ENST00000442301 452 ntBASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 AC112498.1-201ENST00000444401 332 ntBASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 CEACAMP6-201ENST00000452007 574 ntBASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 HMGB3P30-201ENST00000457863 606 ntBASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 Y_RNA.635-201ENST00000459041 101 ntBASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 AC068587.1-201ENST00000483613 781 ntBASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 Y_RNA.654-201ENST00000497848 106 ntBASIC5.7□□□□□ -1.5
BRPF3Q9ULD4 RNA5SP154-201ENST00000516193 111 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms